Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 AL355877.3-201ENST00000622820 899 ntBASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 AL139288.1-201ENST00000623748 933 ntBASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATPAF2Q8N5M1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
ATPAF2Q8N5M1 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATPAF2Q8N5M1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATPAF2Q8N5M1 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
ATPAF2Q8N5M1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATPAF2Q8N5M1 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
ATPAF2Q8N5M1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ATPAF2Q8N5M1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 AL356309.3-201ENST00000624132 1934 ntBASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 AC093525.9-201ENST00000624961 1746 ntBASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 AKR1C7P-201ENST00000305623 895 ntBASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 BX005266.1-201ENST00000473402 457 ntBASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.76■□□□□ 0.43
ATPAF2Q8N5M1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms