Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 AC016396.2-201ENST00000562575 1417 ntBASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC50Q8IVM0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC50Q8IVM0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC50Q8IVM0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC50Q8IVM0 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC50Q8IVM0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CCDC50Q8IVM0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CCDC50Q8IVM0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC50Q8IVM0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.53
CCDC50Q8IVM0 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CCDC50Q8IVM0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC50Q8IVM0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CCDC50Q8IVM0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC50Q8IVM0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC50Q8IVM0 AC096633.1-201ENST00000422446 749 ntBASIC18.33■□□□□ 0.52
CCDC50Q8IVM0 AC104076.2-201ENST00000448912 469 ntBASIC18.33■□□□□ 0.52
CCDC50Q8IVM0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC50Q8IVM0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC50Q8IVM0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.33■□□□□ 0.52
CCDC50Q8IVM0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC50Q8IVM0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC50Q8IVM0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC50Q8IVM0 AC083849.1-201ENST00000615227 514 ntBASIC18.33■□□□□ 0.52
CCDC50Q8IVM0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC50Q8IVM0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC50Q8IVM0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC50Q8IVM0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC50Q8IVM0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC50Q8IVM0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CCDC50Q8IVM0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CCDC50Q8IVM0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC50Q8IVM0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC50Q8IVM0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 AL139327.4-201ENST00000612362 153 ntBASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 AC010460.3-201ENST00000511359 1579 ntBASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC50Q8IVM0 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC50Q8IVM0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms