Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RAB43Q86YS6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB43Q86YS6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB43Q86YS6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB43Q86YS6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.59■□□□□ 0.25
RAB43Q86YS6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB43Q86YS6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB43Q86YS6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RAB43Q86YS6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB43Q86YS6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB43Q86YS6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB43Q86YS6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB43Q86YS6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB43Q86YS6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.59■□□□□ 0.25
RAB43Q86YS6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB43Q86YS6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.59■□□□□ 0.25
RAB43Q86YS6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.59■□□□□ 0.25
RAB43Q86YS6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.59■□□□□ 0.25
RAB43Q86YS6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
RAB43Q86YS6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.59■□□□□ 0.25
RAB43Q86YS6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.59■□□□□ 0.25
RAB43Q86YS6 NKAPP1-205ENST00000585790 367 ntBASIC16.59■□□□□ 0.25
RAB43Q86YS6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB43Q86YS6 MTDHP4-201ENST00000600287 670 ntBASIC16.59■□□□□ 0.25
RAB43Q86YS6 AP000867.4-201ENST00000641616 219 ntBASIC16.59■□□□□ 0.25
RAB43Q86YS6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RAB43Q86YS6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB43Q86YS6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB43Q86YS6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB43Q86YS6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB43Q86YS6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB43Q86YS6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB43Q86YS6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RAB43Q86YS6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
RAB43Q86YS6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RAB43Q86YS6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB43Q86YS6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB43Q86YS6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RAB43Q86YS6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB43Q86YS6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB43Q86YS6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB43Q86YS6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB43Q86YS6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB43Q86YS6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB43Q86YS6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB43Q86YS6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RAB43Q86YS6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RAB43Q86YS6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB43Q86YS6 AC103564.2-201ENST00000432853 1299 ntBASIC16.58■□□□□ 0.24
RAB43Q86YS6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB43Q86YS6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.58■□□□□ 0.24
RAB43Q86YS6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB43Q86YS6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB43Q86YS6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.58■□□□□ 0.24
RAB43Q86YS6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB43Q86YS6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB43Q86YS6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB43Q86YS6 AC025062.2-201ENST00000605477 670 ntBASIC16.58■□□□□ 0.24
RAB43Q86YS6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB43Q86YS6 AC008735.5-201ENST00000623544 497 ntBASIC16.58■□□□□ 0.24
RAB43Q86YS6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RAB43Q86YS6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB43Q86YS6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB43Q86YS6 PMS2P7-201ENST00000506558 1336 ntBASIC16.58■□□□□ 0.24
RAB43Q86YS6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB43Q86YS6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB43Q86YS6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB43Q86YS6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB43Q86YS6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB43Q86YS6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
RAB43Q86YS6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB43Q86YS6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB43Q86YS6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB43Q86YS6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB43Q86YS6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB43Q86YS6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB43Q86YS6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB43Q86YS6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB43Q86YS6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB43Q86YS6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB43Q86YS6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB43Q86YS6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
RAB43Q86YS6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB43Q86YS6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.57■□□□□ 0.24
RAB43Q86YS6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB43Q86YS6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB43Q86YS6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB43Q86YS6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB43Q86YS6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RAB43Q86YS6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB43Q86YS6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB43Q86YS6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
RAB43Q86YS6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB43Q86YS6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB43Q86YS6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB43Q86YS6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB43Q86YS6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RAB43Q86YS6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB43Q86YS6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RAB43Q86YS6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms