Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.98■□□□□ 0.79
OTOP1Q7RTM1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 SLC25A6P5-201ENST00000435663 894 ntBASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 AC112191.1-201ENST00000523689 701 ntBASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
OTOP1Q7RTM1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 MIR6752-201ENST00000618442 71 ntBASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
OTOP1Q7RTM1 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
OTOP1Q7RTM1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 AC005237.2-201ENST00000434368 219 ntBASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 AC022494.1-201ENST00000466044 728 ntBASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 TUBB3P1-201ENST00000405796 1332 ntBASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
OTOP1Q7RTM1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms