Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.67■□□□□ 0.743e-18■□□□□ 9.1
LARP4Q71RC2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.613e-18■□□□□ 9.1
LARP4Q71RC2 RNF114-204ENST00000623528 624 ntTSL 318.6■□□□□ 0.573e-18■□□□□ 9.1
LARP4Q71RC2 RNF114-207ENST00000624666 2006 ntTSL 210.18□□□□□ -0.783e-18■□□□□ 9.1
LARP4Q71RC2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.451e-17■□□□□ 9.1
LARP4Q71RC2 RPL32-203ENST00000396957 1749 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.681e-17■□□□□ 9.1
LARP4Q71RC2 RPL32-204ENST00000429711 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.821e-17■□□□□ 9.1
LARP4Q71RC2 RPL32-201ENST00000273223 567 ntTSL 3 BASIC8.22□□□□□ -1.091e-17■□□□□ 9.1
LARP4Q71RC2 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.461e-17■□□□□ 9.1
LARP4Q71RC2 RPL32-208ENST00000457131 555 ntTSL 25.05□□□□□ -1.61e-17■□□□□ 9.1
LARP4Q71RC2 NDUFB8-208ENST00000531189 577 ntTSL 217.62■□□□□ 0.412e-7■□□□□ 9.1
LARP4Q71RC2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.253e-6■□□□□ 9.1
LARP4Q71RC2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.66■□□□□ 0.13e-6■□□□□ 9.1
LARP4Q71RC2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.09■□□□□ 0.811e-11■□□□□ 9.1
LARP4Q71RC2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.08■□□□□ 0.481e-11■□□□□ 9.1
LARP4Q71RC2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.04■□□□□ 0.481e-11■□□□□ 9.1
LARP4Q71RC2 LRRC75A-AS1-224ENST00000581718 574 ntTSL 217.93■□□□□ 0.461e-11■□□□□ 9.1
LARP4Q71RC2 LRRC75A-AS1-203ENST00000472367 794 ntTSL 316.45■□□□□ 0.221e-11■□□□□ 9.1
LARP4Q71RC2 LRRC75A-AS1-212ENST00000483588 688 ntTSL 315.96■□□□□ 0.151e-11■□□□□ 9.1
LARP4Q71RC2 LRRC75A-AS1-229ENST00000584177 574 ntTSL 415.41■□□□□ 0.061e-11■□□□□ 9.1
LARP4Q71RC2 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.98□□□□□ -0.331e-11■□□□□ 9.1
LARP4Q71RC2 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.98□□□□□ -0.331e-11■□□□□ 9.1
LARP4Q71RC2 LRRC75A-AS1-217ENST00000497774 1662 ntTSL 512.74□□□□□ -0.371e-11■□□□□ 9.1
LARP4Q71RC2 LRRC75A-AS1-206ENST00000477249 891 ntTSL 511.69□□□□□ -0.541e-11■□□□□ 9.1
LARP4Q71RC2 LRRC75A-AS1-207ENST00000478103 712 ntTSL 39.45□□□□□ -0.91e-11■□□□□ 9.1
LARP4Q71RC2 LRRC75A-AS1-227ENST00000583400 712 ntTSL 49.1□□□□□ -0.951e-11■□□□□ 9.1
LARP4Q71RC2 LRRC75A-AS1-223ENST00000581361 843 ntTSL 1 (best) BASIC9.02□□□□□ -0.971e-11■□□□□ 9.1
LARP4Q71RC2 LRRC75A-AS1-222ENST00000580770 572 ntTSL 48.87□□□□□ -0.991e-11■□□□□ 9.1
LARP4Q71RC2 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC7.12□□□□□ -1.271e-11■□□□□ 9.1
LARP4Q71RC2 LRRC75A-AS1-210ENST00000481898 993 ntTSL 1 (best)6.34□□□□□ -1.391e-11■□□□□ 9.1
LARP4Q71RC2 LRRC75A-AS1-211ENST00000483140 936 ntTSL 25.17□□□□□ -1.581e-11■□□□□ 9.1
LARP4Q71RC2 POLR2E-210ENST00000592597 440 ntTSL 213.68□□□□□ -0.228e-7■□□□□ 9.1
LARP4Q71RC2 PLIN3-205ENST00000589163 1699 ntTSL 314.22□□□□□ -0.131e-6■□□□□ 9.1
LARP4Q71RC2 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14□□□□□ -0.171e-6■□□□□ 9.1
LARP4Q71RC2 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.281e-6■□□□□ 9.1
LARP4Q71RC2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.114e-8■□□□□ 9.1
LARP4Q71RC2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.62■■□□□ 1.054e-8■□□□□ 9.1
LARP4Q71RC2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.814e-8■□□□□ 9.1
LARP4Q71RC2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.614e-8■□□□□ 9.1
LARP4Q71RC2 SPHK1-209ENST00000591762 2502 ntTSL 217.58■□□□□ 0.44e-8■□□□□ 9.1
LARP4Q71RC2 RPS13-208ENST00000531908 746 ntTSL 26.71□□□□□ -1.347e-17■□□□□ 9.1
LARP4Q71RC2 RPS13-207ENST00000531008 594 ntTSL 26.55□□□□□ -1.367e-17■□□□□ 9.1
LARP4Q71RC2 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.89■□□□□ 0.31e-323■□□□□ 9.1
LARP4Q71RC2 INS-IGF2-201ENST00000356578 1706 ntTSL 516.63■□□□□ 0.251e-323■□□□□ 9.1
LARP4Q71RC2 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.251e-323■□□□□ 9.1
LARP4Q71RC2 C7orf73-203ENST00000509448 581 ntTSL 415.76■□□□□ 0.113e-6■□□□□ 9.1
LARP4Q71RC2 C7orf73-201ENST00000422968 2004 ntTSL 1 (best)13.25□□□□□ -0.293e-6■□□□□ 9.1
LARP4Q71RC2 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.263e-6■□□□□ 9.1
LARP4Q71RC2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.057e-12■□□□□ 9.1
LARP4Q71RC2 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.37□□□□□ -0.277e-12■□□□□ 9.1
LARP4Q71RC2 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.24□□□□□ -0.297e-12■□□□□ 9.1
LARP4Q71RC2 RPL18A-202ENST00000597648 683 ntTSL 312.65□□□□□ -0.387e-12■□□□□ 9.1
LARP4Q71RC2 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC12.34□□□□□ -0.437e-12■□□□□ 9.1
LARP4Q71RC2 RPLP2-202ENST00000524867 598 ntTSL 223.17■■□□□ 1.32e-29■□□□□ 9.1
LARP4Q71RC2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.037e-7■□□□□ 9.1
LARP4Q71RC2 RPL21-202ENST00000311549 815 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.927e-7■□□□□ 9.1
LARP4Q71RC2 RPL21-201ENST00000272274 616 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.957e-7■□□□□ 9.1
LARP4Q71RC2 RPL21-204ENST00000326092 641 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.987e-7■□□□□ 9.1
LARP4Q71RC2 RPL21-208ENST00000483765 453 ntTSL 36.52□□□□□ -1.377e-7■□□□□ 9.1
LARP4Q71RC2 RPL21-205ENST00000461690 681 ntTSL 56.17□□□□□ -1.427e-7■□□□□ 9.1
LARP4Q71RC2 RPL21-210ENST00000493317 438 ntTSL 23.62□□□□□ -1.837e-7■□□□□ 9.1
LARP4Q71RC2 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.453e-10■□□□□ 9.1
LARP4Q71RC2 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC11.88□□□□□ -0.513e-10■□□□□ 9.1
LARP4Q71RC2 ATP5H-204ENST00000580649 2191 ntTSL 28.64□□□□□ -1.033e-10■□□□□ 9.1
LARP4Q71RC2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.161e-23■□□□□ 9.1
LARP4Q71RC2 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.391e-23■□□□□ 9.1
LARP4Q71RC2 RPL19-201ENST00000225430 732 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.851e-23■□□□□ 9.1
LARP4Q71RC2 RPL19-205ENST00000579374 690 ntAPPRIS ALT1 TSL 2 BASIC9.73□□□□□ -0.851e-23■□□□□ 9.1
LARP4Q71RC2 RPL19-203ENST00000577759 564 nt9.27□□□□□ -0.931e-23■□□□□ 9.1
LARP4Q71RC2 SULT1A1-205ENST00000562058 1876 ntTSL 1 (best)20.33■□□□□ 0.845e-8■□□□□ 9
LARP4Q71RC2 SULT1A1-207ENST00000564818 1653 ntTSL 1 (best)19.01■□□□□ 0.635e-8■□□□□ 9
LARP4Q71RC2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.68■□□□□ 0.585e-8■□□□□ 9
LARP4Q71RC2 SULT1A1-206ENST00000563493 1651 ntTSL 518.63■□□□□ 0.575e-8■□□□□ 9
LARP4Q71RC2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.445e-8■□□□□ 9
LARP4Q71RC2 SULT1A1-210ENST00000567998 7948 ntTSL 214.72□□□□□ -0.055e-8■□□□□ 9
LARP4Q71RC2 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.455e-8■□□□□ 9
LARP4Q71RC2 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.55e-8■□□□□ 9
LARP4Q71RC2 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.65e-8■□□□□ 9
LARP4Q71RC2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.977e-6■□□□□ 9
LARP4Q71RC2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.867e-6■□□□□ 9
LARP4Q71RC2 SNF8-208ENST00000510195 445 ntTSL 224.25■■□□□ 1.477e-6■□□□□ 9
LARP4Q71RC2 PANK2-202ENST00000336066 1843 ntTSL 1 (best)24.12■■□□□ 1.457e-6■□□□□ 9
LARP4Q71RC2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.367e-6■□□□□ 9
LARP4Q71RC2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.337e-6■□□□□ 9
LARP4Q71RC2 SNX3-203ENST00000368979 1537 ntTSL 223.16■■□□□ 1.37e-6■□□□□ 9
LARP4Q71RC2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.287e-6■□□□□ 9
LARP4Q71RC2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.274e-8■□□□□ 9
LARP4Q71RC2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.88■■□□□ 1.257e-6■□□□□ 9
LARP4Q71RC2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.247e-6■□□□□ 9
LARP4Q71RC2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.4■■□□□ 1.187e-6■□□□□ 9
LARP4Q71RC2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.137e-6■□□□□ 9
LARP4Q71RC2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.79■■□□□ 1.082e-7■□□□□ 9
LARP4Q71RC2 LSM4-202ENST00000593564 656 ntTSL 221.68■■□□□ 1.067e-6■□□□□ 9
LARP4Q71RC2 RNF8-201ENST00000229866 2124 ntTSL 221.55■■□□□ 1.047e-6■□□□□ 9
LARP4Q71RC2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.037e-6■□□□□ 9
LARP4Q71RC2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.034e-15■□□□□ 9
LARP4Q71RC2 LSM4-204ENST00000594828 807 ntTSL 221.4■■□□□ 1.027e-6■□□□□ 9
LARP4Q71RC2 COG8-202ENST00000562595 2262 ntTSL 521.09■□□□□ 0.977e-6■□□□□ 9
LARP4Q71RC2 R3HDM4-205ENST00000589445 705 ntTSL 320.98■□□□□ 0.957e-6■□□□□ 9
LARP4Q71RC2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.942e-7■□□□□ 9
Retrieved 100 of 15,922 protein–RNA pairs in 233.3 ms