RNA–Protein interactions for RNA: ENST00000531008.5

RPS13-207, Transcript of ribosomal protein S13, humanhuman

TSL 2

Gene RPS13, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS13-207ENST00000531008 AEBP2Q6ZN18 517 aaPredicted RBP23.08■■□□□ 1.29
RPS13-207ENST00000531008 CHIC1Q5VXU3 224 aa23.01■■□□□ 1.27
RPS13-207ENST00000531008 PHF23Q9BUL5 403 aaPredicted RBP20.21■□□□□ 0.83
RPS13-207ENST00000531008 SENP3Q9H4L4 574 aaPredicted RBP19.64■□□□□ 0.73
RPS13-207ENST00000531008 PLPPR3Q6T4P5 718 aa18.89■□□□□ 0.61
RPS13-207ENST00000531008 FOXD1Q16676 465 aa18.1■□□□□ 0.49
RPS13-207ENST00000531008 ADRA2BP18089 450 aa17.7■□□□□ 0.42
RPS13-207ENST00000531008 PPP6R1Q9UPN7 881 aa17.69■□□□□ 0.42
RPS13-207ENST00000531008 PIAS4Q8N2W9 510 aaPredicted RBP17.17■□□□□ 0.34
RPS13-207ENST00000531008 KCNA4P22459 653 aa16.67■□□□□ 0.26
RPS13-207ENST00000531008 PPP4R3CPQ6ZMV5 832 aa16.65■□□□□ 0.26
RPS13-207ENST00000531008 MSH5O43196 834 aa16.63■□□□□ 0.25
RPS13-207ENST00000531008 NCBP3Q53F19 620 aaKnown RBP16.41■□□□□ 0.22
RPS13-207ENST00000531008 SCAF1Q9H7N4 1312 aaKnown RBP16.34■□□□□ 0.21
RPS13-207ENST00000531008 CNKSR2Q8WXI2 1034 aa16.15■□□□□ 0.18
RPS13-207ENST00000531008 NPM3O75607 178 aaKnown RBP16.08■□□□□ 0.16
RPS13-207ENST00000531008 SLC4A1APQ9BWU0 796 aaKnown RBP15.99■□□□□ 0.15
RPS13-207ENST00000531008 MAPK8IP2Q13387 824 aaPredicted RBP15.92■□□□□ 0.14
RPS13-207ENST00000531008 EHMT2Q96KQ7 1210 aa15.9■□□□□ 0.14
RPS13-207ENST00000531008 RNF216Q9NWF9 866 aaPredicted RBP15.73■□□□□ 0.11
RPS13-207ENST00000531008 DMRT2Q9Y5R5 561 aa15.72■□□□□ 0.11
RPS13-207ENST00000531008 DNAJC5BQ9UF47 199 aa15.7■□□□□ 0.1
RPS13-207ENST00000531008 CSRNP3Q8WYN3 585 aa15.59■□□□□ 0.09
RPS13-207ENST00000531008 HOXD11P31277 338 aaPredicted RBP15.56■□□□□ 0.08
RPS13-207ENST00000531008 ZBTB22O15209 634 aa15.31■□□□□ 0.04
RPS13-207ENST00000531008 FOXD4L1Q9NU39 408 aa15.29■□□□□ 0.04
RPS13-207ENST00000531008 SLC4A2P04920 1241 aa15.07■□□□□ 0
RPS13-207ENST00000531008 DCAF8L1A6NGE4 600 aa14.95□□□□□ -0.02
RPS13-207ENST00000531008 MYCNP04198 464 aaPredicted RBP14.9□□□□□ -0.02
RPS13-207ENST00000531008 ATXN8OSP0DMR3 200 aa14.8□□□□□ -0.04
RPS13-207ENST00000531008 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.8□□□□□ -0.04
RPS13-207ENST00000531008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.65□□□□□ -0.06
RPS13-207ENST00000531008 HNRNPUL2Q1KMD3 747 aaKnown RBP14.65□□□□□ -0.06
RPS13-207ENST00000531008 SAMD1Q6SPF0 538 aaPredicted RBP14.59□□□□□ -0.07
RPS13-207ENST00000531008 U3KPZ7 1027 aaPredicted RBP14.58□□□□□ -0.08
RPS13-207ENST00000531008 APLP2Q06481 763 aa14.43□□□□□ -0.1
RPS13-207ENST00000531008 POTEDQ86YR6 584 aa14.37□□□□□ -0.11
RPS13-207ENST00000531008 ATF5Q9Y2D1 282 aaPredicted RBP14.36□□□□□ -0.11
RPS13-207ENST00000531008 RNF39Q9H2S5 420 aa14.24□□□□□ -0.13
RPS13-207ENST00000531008 ZNF219Q9P2Y4 722 aaPredicted RBP14.18□□□□□ -0.14
RPS13-207ENST00000531008 C1QBPQ07021 282 aaKnown RBP14.15□□□□□ -0.14
RPS13-207ENST00000531008 FKBP8Q14318 412 aa14.06□□□□□ -0.16
RPS13-207ENST00000531008 SPINK5Q9NQ38 1064 aaPredicted RBP14.02□□□□□ -0.17
RPS13-207ENST00000531008 TRHP20396 242 aaPredicted RBP13.99□□□□□ -0.17
RPS13-207ENST00000531008 CAPN15O75808 1086 aa13.98□□□□□ -0.17
RPS13-207ENST00000531008 POLA2Q14181 598 aa13.88□□□□□ -0.19
RPS13-207ENST00000531008 FBLN2P98095 1184 aa13.86□□□□□ -0.19
RPS13-207ENST00000531008 MKRN4PQ13434 485 aaPredicted RBP13.79□□□□□ -0.2
RPS13-207ENST00000531008 ZBTB12Q9Y330 459 aaPredicted RBP13.79□□□□□ -0.2
RPS13-207ENST00000531008 SPDYE4A6NLX3 237 aa13.71□□□□□ -0.21
RPS13-207ENST00000531008 ABCB7O75027 752 aa13.71□□□□□ -0.21
RPS13-207ENST00000531008 DSG3P32926 999 aa13.67□□□□□ -0.22
RPS13-207ENST00000531008 CACNB1Q02641 598 aaPredicted RBP13.58□□□□□ -0.24
RPS13-207ENST00000531008 AMER1Q5JTC6 1135 aaPredicted RBP13.58□□□□□ -0.24
RPS13-207ENST00000531008 PROM2Q8N271 834 aa13.58□□□□□ -0.24
RPS13-207ENST00000531008 FBXO3Q9UK99 471 aa13.57□□□□□ -0.24
RPS13-207ENST00000531008 RTN4Q9NQC3 1192 aaKnown RBP13.45□□□□□ -0.26
RPS13-207ENST00000531008 SPDYE2BA6NHP3 402 aa13.42□□□□□ -0.26
RPS13-207ENST00000531008 SPDYE6P0CI01 402 aa13.42□□□□□ -0.26
RPS13-207ENST00000531008 SPDYE2Q495Y8 402 aa13.42□□□□□ -0.26
RPS13-207ENST00000531008 ZNF692Q9BU19 519 aaPredicted RBP13.38□□□□□ -0.27
RPS13-207ENST00000531008 OSCARQ8IYS5 282 aa13.36□□□□□ -0.27
RPS13-207ENST00000531008 SSUH2Q9Y2M2 353 aa13.32□□□□□ -0.28
RPS13-207ENST00000531008 VASPP50552 380 aaPredicted RBP13.3□□□□□ -0.28
RPS13-207ENST00000531008 STAG3Q9UJ98 1225 aa13.21□□□□□ -0.29
RPS13-207ENST00000531008 PABPN1Q86U42 306 aaKnown RBP eCLIP13.19□□□□□ -0.3
RPS13-207ENST00000531008 IFNLR1Q8IU57 520 aaPredicted RBP13.12□□□□□ -0.31
RPS13-207ENST00000531008 RBM42Q9BTD8 480 aaKnown RBP13.1□□□□□ -0.31
RPS13-207ENST00000531008 PLCD3Q8N3E9 789 aa13□□□□□ -0.33
RPS13-207ENST00000531008 AKT1S1Q96B36 256 aa13□□□□□ -0.33
RPS13-207ENST00000531008 KLHL34Q8N239 644 aa12.98□□□□□ -0.33
RPS13-207ENST00000531008 MIER1Q8N108 512 aa12.96□□□□□ -0.33
RPS13-207ENST00000531008 PLEKHG5O94827 1062 aa12.95□□□□□ -0.34
RPS13-207ENST00000531008 SPOCK2Q92563 424 aa12.95□□□□□ -0.34
RPS13-207ENST00000531008 SPDYE1Q8NFV5 336 aaPredicted RBP12.92□□□□□ -0.34
RPS13-207ENST00000531008 ZBTB47Q9UFB7 747 aaPredicted RBP12.91□□□□□ -0.34
RPS13-207ENST00000531008 SLC24A1O60721 1099 aa12.84□□□□□ -0.35
RPS13-207ENST00000531008 PKD2Q13563 968 aa12.83□□□□□ -0.36
RPS13-207ENST00000531008 REM2Q8IYK8 340 aaPredicted RBP12.83□□□□□ -0.36
RPS13-207ENST00000531008 CLEC11AQ9Y240 323 aa12.76□□□□□ -0.37
RPS13-207ENST00000531008 PRR29P0C7W0 189 aa12.75□□□□□ -0.37
RPS13-207ENST00000531008 ECM2O94769 699 aaPredicted RBP12.7□□□□□ -0.38
RPS13-207ENST00000531008 TRIM41Q8WV44 630 aa12.66□□□□□ -0.38
RPS13-207ENST00000531008 PITPNM1O00562 1244 aa12.65□□□□□ -0.38
RPS13-207ENST00000531008 DCAF8L2P0C7V8 631 aa12.65□□□□□ -0.38
RPS13-207ENST00000531008 CREBZFQ9NS37 354 aa12.65□□□□□ -0.38
RPS13-207ENST00000531008 CIZ1Q9ULV3 898 aaPredicted RBP12.64□□□□□ -0.39
RPS13-207ENST00000531008 GSE1Q14687 1217 aa12.61□□□□□ -0.39
RPS13-207ENST00000531008 NUBP1P53384 320 aa12.59□□□□□ -0.39
RPS13-207ENST00000531008 MNX1P50219 401 aaPredicted RBP12.57□□□□□ -0.4
RPS13-207ENST00000531008 RGL2O15211 777 aa12.53□□□□□ -0.4
RPS13-207ENST00000531008 NPM1P06748 294 aaKnown RBP eCLIP12.53□□□□□ -0.4
RPS13-207ENST00000531008 PLCB2Q00722 1185 aa12.52□□□□□ -0.41
RPS13-207ENST00000531008 FAM212AQ96EL1 285 aa12.51□□□□□ -0.41
RPS13-207ENST00000531008 DCAF8Q5TAQ9 597 aa12.5□□□□□ -0.41
RPS13-207ENST00000531008 BBXQ8WY36 941 aaPredicted RBP12.46□□□□□ -0.41
RPS13-207ENST00000531008 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.44□□□□□ -0.42
RPS13-207ENST00000531008 CHRM1P11229 460 aaPredicted RBP12.42□□□□□ -0.42
RPS13-207ENST00000531008 TAOK2Q9UL54 1235 aa12.42□□□□□ -0.42
RPS13-207ENST00000531008 RASEFQ8IZ41 740 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms