Protein–RNA interactions for Protein: Q6P2S7

TTC41P, Putative tetratricopeptide repeat protein 41, humanhuman

Predictions only

Length 1,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41PQ6P2S7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
TTC41PQ6P2S7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 AL121761.2-201ENST00000598007 1648 ntBASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 AC080080.1-201ENST00000625121 2420 ntBASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 AP002414.1-201ENST00000391405 1147 ntBASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 KRT18P67-201ENST00000432816 1264 ntBASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC21.01■□□□□ 0.95
TTC41PQ6P2S7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
TTC41PQ6P2S7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC21■□□□□ 0.95
TTC41PQ6P2S7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21■□□□□ 0.95
TTC41PQ6P2S7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TTC41PQ6P2S7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TTC41PQ6P2S7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21■□□□□ 0.95
TTC41PQ6P2S7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC21■□□□□ 0.95
TTC41PQ6P2S7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TTC41PQ6P2S7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC21■□□□□ 0.95
TTC41PQ6P2S7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TTC41PQ6P2S7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TTC41PQ6P2S7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21■□□□□ 0.95
TTC41PQ6P2S7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TTC41PQ6P2S7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21■□□□□ 0.95
TTC41PQ6P2S7 KRT18P27-201ENST00000427733 1299 ntBASIC21■□□□□ 0.95
TTC41PQ6P2S7 RPS2P1-201ENST00000434010 821 ntBASIC21■□□□□ 0.95
TTC41PQ6P2S7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21■□□□□ 0.95
TTC41PQ6P2S7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21■□□□□ 0.95
TTC41PQ6P2S7 OR7E14P-202ENST00000530490 1290 ntBASIC21■□□□□ 0.95
TTC41PQ6P2S7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21■□□□□ 0.95
TTC41PQ6P2S7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21■□□□□ 0.95
TTC41PQ6P2S7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21■□□□□ 0.95
TTC41PQ6P2S7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21■□□□□ 0.95
TTC41PQ6P2S7 AC006557.2-201ENST00000592985 1240 ntBASIC21■□□□□ 0.95
TTC41PQ6P2S7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21■□□□□ 0.95
TTC41PQ6P2S7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
TTC41PQ6P2S7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC21■□□□□ 0.95
TTC41PQ6P2S7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TTC41PQ6P2S7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21■□□□□ 0.95
TTC41PQ6P2S7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 AP002469.2-201ENST00000531724 424 ntBASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.99■□□□□ 0.95
TTC41PQ6P2S7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TTC41PQ6P2S7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms