Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 PRSS29P-201ENST00000440800 595 ntBASIC16.02■□□□□ 0.16
H3F3CQ6NXT2 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.02■□□□□ 0.16
H3F3CQ6NXT2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.02■□□□□ 0.16
H3F3CQ6NXT2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.02■□□□□ 0.16
H3F3CQ6NXT2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.02■□□□□ 0.16
H3F3CQ6NXT2 AC040169.1-201ENST00000565382 521 ntBASIC16.02■□□□□ 0.16
H3F3CQ6NXT2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.02■□□□□ 0.16
H3F3CQ6NXT2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.02■□□□□ 0.16
H3F3CQ6NXT2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.02■□□□□ 0.16
H3F3CQ6NXT2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.02■□□□□ 0.16
H3F3CQ6NXT2 AL139327.4-201ENST00000612362 153 ntBASIC16.02■□□□□ 0.16
H3F3CQ6NXT2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.02■□□□□ 0.16
H3F3CQ6NXT2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
H3F3CQ6NXT2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
H3F3CQ6NXT2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
H3F3CQ6NXT2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
H3F3CQ6NXT2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
H3F3CQ6NXT2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
H3F3CQ6NXT2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
H3F3CQ6NXT2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
H3F3CQ6NXT2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
H3F3CQ6NXT2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.02■□□□□ 0.15
H3F3CQ6NXT2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
H3F3CQ6NXT2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 PTCHD3P3-201ENST00000403073 906 ntBASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 BX842568.4-201ENST00000421222 227 ntBASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 AC007967.2-201ENST00000432613 625 ntBASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 AC108073.2-201ENST00000464002 357 ntBASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 AC068880.1-201ENST00000507289 2297 ntBASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.01■□□□□ 0.15
H3F3CQ6NXT2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16■□□□□ 0.15
H3F3CQ6NXT2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16■□□□□ 0.15
H3F3CQ6NXT2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
H3F3CQ6NXT2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
H3F3CQ6NXT2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H3F3CQ6NXT2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16■□□□□ 0.15
H3F3CQ6NXT2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16■□□□□ 0.15
H3F3CQ6NXT2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H3F3CQ6NXT2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
H3F3CQ6NXT2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H3F3CQ6NXT2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16■□□□□ 0.15
H3F3CQ6NXT2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H3F3CQ6NXT2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H3F3CQ6NXT2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H3F3CQ6NXT2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H3F3CQ6NXT2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16■□□□□ 0.15
H3F3CQ6NXT2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H3F3CQ6NXT2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H3F3CQ6NXT2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16■□□□□ 0.15
H3F3CQ6NXT2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
H3F3CQ6NXT2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16■□□□□ 0.15
H3F3CQ6NXT2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16■□□□□ 0.15
H3F3CQ6NXT2 CRYGEP-201ENST00000412192 528 ntBASIC16■□□□□ 0.15
H3F3CQ6NXT2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16■□□□□ 0.15
H3F3CQ6NXT2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16■□□□□ 0.15
H3F3CQ6NXT2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16■□□□□ 0.15
H3F3CQ6NXT2 AC092865.5-201ENST00000545435 363 ntBASIC16■□□□□ 0.15
H3F3CQ6NXT2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16■□□□□ 0.15
H3F3CQ6NXT2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16■□□□□ 0.15
H3F3CQ6NXT2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16■□□□□ 0.15
H3F3CQ6NXT2 AC064836.3-201ENST00000607928 673 ntBASIC16■□□□□ 0.15
H3F3CQ6NXT2 GGTLC5P-201ENST00000617623 998 ntBASIC16■□□□□ 0.15
H3F3CQ6NXT2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16■□□□□ 0.15
H3F3CQ6NXT2 AC139530.3-201ENST00000620344 690 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms