Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 ALOX12P2-203ENST00000570921 1945 ntBASIC16.37■□□□□ 0.21
LPCAT4Q643R3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 KRT16P1-201ENST00000399124 1418 ntBASIC16.36■□□□□ 0.21
LPCAT4Q643R3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 AC069152.1-201ENST00000438030 544 ntBASIC16.36■□□□□ 0.21
LPCAT4Q643R3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 AC026271.3-201ENST00000571884 352 ntBASIC16.36■□□□□ 0.21
LPCAT4Q643R3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 AC008403.3-201ENST00000598924 454 ntBASIC16.36■□□□□ 0.21
LPCAT4Q643R3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 AC133041.1-202ENST00000642053 222 ntBASIC16.36■□□□□ 0.21
LPCAT4Q643R3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.36■□□□□ 0.21
LPCAT4Q643R3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 AC239809.2-201ENST00000415381 517 ntBASIC16.35■□□□□ 0.21
LPCAT4Q643R3 AC005104.2-201ENST00000427818 678 ntBASIC16.35■□□□□ 0.21
LPCAT4Q643R3 B3GAT3P1-201ENST00000471720 806 ntBASIC16.35■□□□□ 0.21
LPCAT4Q643R3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 AC233263.1-201ENST00000578059 224 ntBASIC16.35■□□□□ 0.21
LPCAT4Q643R3 CR392000.1-201ENST00000624770 1228 ntBASIC16.35■□□□□ 0.21
LPCAT4Q643R3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.35■□□□□ 0.21
LPCAT4Q643R3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms