Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 AC104819.1-201ENST00000504587 486 ntBASIC17.98■□□□□ 0.47
LRRC38Q5VT99 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 AC069148.1-201ENST00000608741 768 ntBASIC17.98■□□□□ 0.47
LRRC38Q5VT99 AC073592.4-201ENST00000623827 446 ntBASIC17.98■□□□□ 0.47
LRRC38Q5VT99 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 AC091076.1-201ENST00000610741 619 ntBASIC17.97■□□□□ 0.47
LRRC38Q5VT99 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 AL358472.4-201ENST00000633140 710 ntBASIC17.97■□□□□ 0.47
LRRC38Q5VT99 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 AC124067.4-201ENST00000519691 2379 ntBASIC17.97■□□□□ 0.47
LRRC38Q5VT99 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC38Q5VT99 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC38Q5VT99 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRC38Q5VT99 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC38Q5VT99 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC38Q5VT99 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC38Q5VT99 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRC38Q5VT99 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC38Q5VT99 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LRRC38Q5VT99 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRC38Q5VT99 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC38Q5VT99 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
LRRC38Q5VT99 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC38Q5VT99 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRC38Q5VT99 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC38Q5VT99 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.96■□□□□ 0.47
LRRC38Q5VT99 AP000867.3-201ENST00000524675 377 ntBASIC17.96■□□□□ 0.47
LRRC38Q5VT99 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRC38Q5VT99 AL118508.1-201ENST00000613502 2345 ntBASIC17.96■□□□□ 0.47
LRRC38Q5VT99 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC38Q5VT99 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC38Q5VT99 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRC38Q5VT99 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRC38Q5VT99 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
LRRC38Q5VT99 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LRRC38Q5VT99 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRC38Q5VT99 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC38Q5VT99 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LRRC38Q5VT99 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC38Q5VT99 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LRRC38Q5VT99 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC38Q5VT99 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC38Q5VT99 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC38Q5VT99 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC38Q5VT99 AC148477.5-201ENST00000625164 1645 ntBASIC17.95■□□□□ 0.46
LRRC38Q5VT99 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC38Q5VT99 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC38Q5VT99 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC38Q5VT99 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
LRRC38Q5VT99 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms