Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.63■□□□□ 0.89
PDS5AQ29RF7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDS5AQ29RF7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.63■□□□□ 0.89
PDS5AQ29RF7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.63■□□□□ 0.89
PDS5AQ29RF7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.63■□□□□ 0.89
PDS5AQ29RF7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
PDS5AQ29RF7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PDS5AQ29RF7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PDS5AQ29RF7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDS5AQ29RF7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
PDS5AQ29RF7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 AC140658.5-201ENST00000438532 169 ntBASIC20.62■□□□□ 0.89
PDS5AQ29RF7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PDS5AQ29RF7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDS5AQ29RF7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDS5AQ29RF7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.61■□□□□ 0.89
PDS5AQ29RF7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PDS5AQ29RF7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDS5AQ29RF7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PDS5AQ29RF7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDS5AQ29RF7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.61■□□□□ 0.89
PDS5AQ29RF7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.61■□□□□ 0.89
PDS5AQ29RF7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDS5AQ29RF7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.61■□□□□ 0.89
PDS5AQ29RF7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.61■□□□□ 0.89
PDS5AQ29RF7 MIR4515-201ENST00000584082 81 ntBASIC20.61■□□□□ 0.89
PDS5AQ29RF7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDS5AQ29RF7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDS5AQ29RF7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDS5AQ29RF7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDS5AQ29RF7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDS5AQ29RF7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDS5AQ29RF7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PDS5AQ29RF7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDS5AQ29RF7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDS5AQ29RF7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDS5AQ29RF7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PDS5AQ29RF7 AC092919.2-201ENST00000623631 1645 ntBASIC20.6■□□□□ 0.89
PDS5AQ29RF7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
PDS5AQ29RF7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDS5AQ29RF7 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.6■□□□□ 0.89
PDS5AQ29RF7 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.6■□□□□ 0.89
PDS5AQ29RF7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDS5AQ29RF7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.6■□□□□ 0.89
PDS5AQ29RF7 CEND1P1-201ENST00000451006 455 ntBASIC20.6■□□□□ 0.89
PDS5AQ29RF7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDS5AQ29RF7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDS5AQ29RF7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PDS5AQ29RF7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDS5AQ29RF7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDS5AQ29RF7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.6■□□□□ 0.89
PDS5AQ29RF7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDS5AQ29RF7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDS5AQ29RF7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.6■□□□□ 0.89
PDS5AQ29RF7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.6■□□□□ 0.89
PDS5AQ29RF7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDS5AQ29RF7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDS5AQ29RF7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PDS5AQ29RF7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDS5AQ29RF7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.59■□□□□ 0.89
PDS5AQ29RF7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.59■□□□□ 0.89
PDS5AQ29RF7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.59■□□□□ 0.89
PDS5AQ29RF7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PDS5AQ29RF7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDS5AQ29RF7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDS5AQ29RF7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.59■□□□□ 0.89
PDS5AQ29RF7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDS5AQ29RF7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDS5AQ29RF7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.59■□□□□ 0.89
PDS5AQ29RF7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.59■□□□□ 0.89
PDS5AQ29RF7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDS5AQ29RF7 AP000344.2-201ENST00000512987 629 ntBASIC20.59■□□□□ 0.89
PDS5AQ29RF7 AC112191.1-201ENST00000523689 701 ntBASIC20.59■□□□□ 0.89
PDS5AQ29RF7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.59■□□□□ 0.89
PDS5AQ29RF7 AC091167.2-201ENST00000579581 588 ntBASIC20.59■□□□□ 0.89
PDS5AQ29RF7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.59■□□□□ 0.89
PDS5AQ29RF7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDS5AQ29RF7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms