Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
IRX4P78413 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX4P78413 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX4P78413 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IRX4P78413 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.07■□□□□ 0.48
IRX4P78413 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.07■□□□□ 0.48
IRX4P78413 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IRX4P78413 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IRX4P78413 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IRX4P78413 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
IRX4P78413 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IRX4P78413 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
IRX4P78413 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IRX4P78413 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.06■□□□□ 0.48
IRX4P78413 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
IRX4P78413 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
IRX4P78413 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
IRX4P78413 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.06■□□□□ 0.48
IRX4P78413 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IRX4P78413 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IRX4P78413 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.06■□□□□ 0.48
IRX4P78413 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.06■□□□□ 0.48
IRX4P78413 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
IRX4P78413 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.06■□□□□ 0.48
IRX4P78413 HNRNPDP1-201ENST00000439535 754 ntBASIC18.06■□□□□ 0.48
IRX4P78413 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.06■□□□□ 0.48
IRX4P78413 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.06■□□□□ 0.48
IRX4P78413 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.06■□□□□ 0.48
IRX4P78413 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
IRX4P78413 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.06■□□□□ 0.48
IRX4P78413 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IRX4P78413 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
IRX4P78413 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.06■□□□□ 0.48
IRX4P78413 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IRX4P78413 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IRX4P78413 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.06■□□□□ 0.48
IRX4P78413 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IRX4P78413 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
IRX4P78413 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
IRX4P78413 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.05■□□□□ 0.48
IRX4P78413 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IRX4P78413 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IRX4P78413 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IRX4P78413 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IRX4P78413 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IRX4P78413 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
IRX4P78413 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
IRX4P78413 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IRX4P78413 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.05■□□□□ 0.48
IRX4P78413 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
IRX4P78413 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
IRX4P78413 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
IRX4P78413 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
IRX4P78413 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.05■□□□□ 0.48
IRX4P78413 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.05■□□□□ 0.48
IRX4P78413 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IRX4P78413 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.05■□□□□ 0.48
IRX4P78413 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IRX4P78413 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
IRX4P78413 AL355877.3-201ENST00000622820 899 ntBASIC18.05■□□□□ 0.48
IRX4P78413 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IRX4P78413 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.05■□□□□ 0.48
IRX4P78413 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
IRX4P78413 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
IRX4P78413 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
IRX4P78413 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IRX4P78413 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
IRX4P78413 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
IRX4P78413 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IRX4P78413 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
IRX4P78413 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IRX4P78413 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IRX4P78413 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IRX4P78413 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
IRX4P78413 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IRX4P78413 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.04■□□□□ 0.48
IRX4P78413 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
IRX4P78413 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.04■□□□□ 0.48
IRX4P78413 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IRX4P78413 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IRX4P78413 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.04■□□□□ 0.48
IRX4P78413 MIR149-201ENST00000384879 89 ntBASIC18.04■□□□□ 0.48
IRX4P78413 RCN1P2-201ENST00000398357 915 ntBASIC18.04■□□□□ 0.48
IRX4P78413 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IRX4P78413 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.04■□□□□ 0.48
IRX4P78413 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.04■□□□□ 0.48
IRX4P78413 SCARNA2-201ENST00000458748 420 ntBASIC18.04■□□□□ 0.48
IRX4P78413 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.04■□□□□ 0.48
IRX4P78413 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IRX4P78413 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.04■□□□□ 0.48
IRX4P78413 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.04■□□□□ 0.48
IRX4P78413 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.04■□□□□ 0.48
IRX4P78413 AL691403.2-201ENST00000618460 490 ntBASIC18.04■□□□□ 0.48
IRX4P78413 AC055717.3-201ENST00000622967 595 ntBASIC18.04■□□□□ 0.48
IRX4P78413 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.04■□□□□ 0.48
IRX4P78413 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
IRX4P78413 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
IRX4P78413 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IRX4P78413 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IRX4P78413 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms