Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
RPL39P62891 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC12.3□□□□□ -0.44
RPL39P62891 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
RPL39P62891 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P62891 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC12.29□□□□□ -0.44
RPL39P62891 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC12.29□□□□□ -0.44
RPL39P62891 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC12.29□□□□□ -0.44
RPL39P62891 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RPL39P62891 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RPL39P62891 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC12.29□□□□□ -0.44
RPL39P62891 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RPL39P62891 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RPL39P62891 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RPL39P62891 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
RPL39P62891 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RPL39P62891 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC12.29□□□□□ -0.44
RPL39P62891 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RPL39P62891 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC12.29□□□□□ -0.44
RPL39P62891 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC12.29□□□□□ -0.44
RPL39P62891 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
RPL39P62891 KRT18P65-201ENST00000439811 1286 ntBASIC12.29□□□□□ -0.44
RPL39P62891 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC12.29□□□□□ -0.44
RPL39P62891 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC12.29□□□□□ -0.44
RPL39P62891 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC12.29□□□□□ -0.44
RPL39P62891 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC12.29□□□□□ -0.44
RPL39P62891 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RPL39P62891 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RPL39P62891 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.29□□□□□ -0.44
RPL39P62891 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RPL39P62891 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RPL39P62891 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RPL39P62891 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
RPL39P62891 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
RPL39P62891 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC12.29□□□□□ -0.44
RPL39P62891 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RPL39P62891 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
RPL39P62891 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
RPL39P62891 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC12.29□□□□□ -0.44
RPL39P62891 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RPL39P62891 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
RPL39P62891 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RPL39P62891 PAUPAR-201ENST00000630360 2965 ntBASIC12.29□□□□□ -0.44
RPL39P62891 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RPL39P62891 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RPL39P62891 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RPL39P62891 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RPL39P62891 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC12.29□□□□□ -0.44
RPL39P62891 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
RPL39P62891 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RPL39P62891 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.29□□□□□ -0.44
RPL39P62891 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RPL39P62891 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 AC093525.9-201ENST00000624961 1746 ntBASIC12.28□□□□□ -0.44
RPL39P62891 AC092068.3-201ENST00000587894 2016 ntBASIC12.28□□□□□ -0.44
RPL39P62891 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RPL39P62891 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.28□□□□□ -0.44
RPL39P62891 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
RPL39P62891 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
RPL39P62891 ACE-204ENST00000428043 5120 ntTSL 2 BASIC12.28□□□□□ -0.44
RPL39P62891 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC12.28□□□□□ -0.44
RPL39P62891 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RPL39P62891 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
RPL39P62891 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC12.28□□□□□ -0.44
RPL39P62891 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC12.28□□□□□ -0.44
RPL39P62891 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC12.28□□□□□ -0.44
RPL39P62891 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
RPL39P62891 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC12.28□□□□□ -0.44
RPL39P62891 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC12.28□□□□□ -0.44
RPL39P62891 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 AC005104.2-201ENST00000427818 678 ntBASIC12.28□□□□□ -0.44
RPL39P62891 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RPL39P62891 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RPL39P62891 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.28□□□□□ -0.44
RPL39P62891 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC12.28□□□□□ -0.44
RPL39P62891 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RPL39P62891 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms