Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
USP46P62068 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP46P62068 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP46P62068 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
USP46P62068 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.22■□□□□ 0.51
USP46P62068 LYSMD4-203ENST00000378904 2122 ntBASIC18.22■□□□□ 0.51
USP46P62068 PMS2P7-201ENST00000506558 1336 ntBASIC18.22■□□□□ 0.51
USP46P62068 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.22■□□□□ 0.51
USP46P62068 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP46P62068 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.22■□□□□ 0.51
USP46P62068 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP46P62068 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.21■□□□□ 0.51
USP46P62068 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
USP46P62068 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
USP46P62068 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.21■□□□□ 0.51
USP46P62068 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
USP46P62068 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP46P62068 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP46P62068 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP46P62068 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP46P62068 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP46P62068 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP46P62068 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP46P62068 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.21■□□□□ 0.51
USP46P62068 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.21■□□□□ 0.51
USP46P62068 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.21■□□□□ 0.51
USP46P62068 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP46P62068 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.21■□□□□ 0.51
USP46P62068 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.21■□□□□ 0.51
USP46P62068 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
USP46P62068 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.21■□□□□ 0.51
USP46P62068 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC18.21■□□□□ 0.51
USP46P62068 AC009053.2-201ENST00000563701 2365 ntBASIC18.21■□□□□ 0.51
USP46P62068 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP46P62068 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP46P62068 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.21■□□□□ 0.51
USP46P62068 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP46P62068 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP46P62068 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP46P62068 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP46P62068 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.21■□□□□ 0.51
USP46P62068 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP46P62068 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.21■□□□□ 0.51
USP46P62068 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
USP46P62068 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
USP46P62068 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP46P62068 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.2■□□□□ 0.5
USP46P62068 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.2■□□□□ 0.5
USP46P62068 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
USP46P62068 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP46P62068 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP46P62068 PTCHD3P3-201ENST00000403073 906 ntBASIC18.2■□□□□ 0.5
USP46P62068 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.2■□□□□ 0.5
USP46P62068 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.2■□□□□ 0.5
USP46P62068 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
USP46P62068 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.2■□□□□ 0.5
USP46P62068 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
USP46P62068 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
USP46P62068 FAM197Y3-203ENST00000618346 717 ntBASIC18.2■□□□□ 0.5
USP46P62068 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.2■□□□□ 0.5
USP46P62068 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP46P62068 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP46P62068 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP46P62068 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP46P62068 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP46P62068 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP46P62068 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.2■□□□□ 0.5
USP46P62068 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
USP46P62068 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP46P62068 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP46P62068 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.19■□□□□ 0.5
USP46P62068 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP46P62068 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.19■□□□□ 0.5
USP46P62068 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USP46P62068 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.19■□□□□ 0.5
USP46P62068 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP46P62068 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP46P62068 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP46P62068 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP46P62068 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP46P62068 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.19■□□□□ 0.5
USP46P62068 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.19■□□□□ 0.5
USP46P62068 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.19■□□□□ 0.5
USP46P62068 KRT18P3-201ENST00000451602 1288 ntBASIC18.19■□□□□ 0.5
USP46P62068 AC108073.2-201ENST00000464002 357 ntBASIC18.19■□□□□ 0.5
USP46P62068 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
USP46P62068 IGHV3-65-201ENST00000523210 341 ntBASIC18.19■□□□□ 0.5
USP46P62068 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USP46P62068 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.19■□□□□ 0.5
USP46P62068 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
USP46P62068 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.19■□□□□ 0.5
USP46P62068 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP46P62068 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USP46P62068 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.19■□□□□ 0.5
USP46P62068 GPR89P-201ENST00000407924 1495 ntBASIC18.19■□□□□ 0.5
USP46P62068 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USP46P62068 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USP46P62068 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USP46P62068 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USP46P62068 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms