Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.33■□□□□ 0.84
RHBDL3P58872 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.32■□□□□ 0.84
RHBDL3P58872 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHBDL3P58872 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RHBDL3P58872 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RHBDL3P58872 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHBDL3P58872 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RHBDL3P58872 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.32■□□□□ 0.84
RHBDL3P58872 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RHBDL3P58872 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RHBDL3P58872 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHBDL3P58872 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RHBDL3P58872 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHBDL3P58872 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHBDL3P58872 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RHBDL3P58872 HMGA1P7-201ENST00000406908 502 ntBASIC20.32■□□□□ 0.84
RHBDL3P58872 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.32■□□□□ 0.84
RHBDL3P58872 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.32■□□□□ 0.84
RHBDL3P58872 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.32■□□□□ 0.84
RHBDL3P58872 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.32■□□□□ 0.84
RHBDL3P58872 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.32■□□□□ 0.84
RHBDL3P58872 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.32■□□□□ 0.84
RHBDL3P58872 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.32■□□□□ 0.84
RHBDL3P58872 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHBDL3P58872 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHBDL3P58872 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHBDL3P58872 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RHBDL3P58872 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHBDL3P58872 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RHBDL3P58872 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHBDL3P58872 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
RHBDL3P58872 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.32■□□□□ 0.84
RHBDL3P58872 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHBDL3P58872 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RHBDL3P58872 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RHBDL3P58872 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RHBDL3P58872 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RHBDL3P58872 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RHBDL3P58872 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.31■□□□□ 0.84
RHBDL3P58872 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
RHBDL3P58872 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RHBDL3P58872 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.31■□□□□ 0.84
RHBDL3P58872 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RHBDL3P58872 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RHBDL3P58872 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.31■□□□□ 0.84
RHBDL3P58872 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RHBDL3P58872 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RHBDL3P58872 AC002056.1-201ENST00000395613 760 ntBASIC20.31■□□□□ 0.84
RHBDL3P58872 AL355306.1-201ENST00000415580 579 ntBASIC20.31■□□□□ 0.84
RHBDL3P58872 CYMP-203ENST00000474680 1263 ntBASIC20.31■□□□□ 0.84
RHBDL3P58872 THTPA-204ENST00000554970 569 ntTSL 4 BASIC20.31■□□□□ 0.84
RHBDL3P58872 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.31■□□□□ 0.84
RHBDL3P58872 THTPA-206ENST00000556015 535 ntTSL 3 BASIC20.31■□□□□ 0.84
RHBDL3P58872 DUX4L17-201ENST00000557360 1267 ntBASIC20.31■□□□□ 0.84
RHBDL3P58872 AC004835.2-201ENST00000603762 682 ntBASIC20.31■□□□□ 0.84
RHBDL3P58872 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.31■□□□□ 0.84
RHBDL3P58872 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
RHBDL3P58872 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.31■□□□□ 0.84
RHBDL3P58872 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RHBDL3P58872 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.31■□□□□ 0.84
RHBDL3P58872 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RHBDL3P58872 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RHBDL3P58872 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.31■□□□□ 0.84
RHBDL3P58872 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.3■□□□□ 0.84
RHBDL3P58872 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHBDL3P58872 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RHBDL3P58872 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHBDL3P58872 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RHBDL3P58872 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.3■□□□□ 0.84
RHBDL3P58872 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHBDL3P58872 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHBDL3P58872 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RHBDL3P58872 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHBDL3P58872 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.3■□□□□ 0.84
RHBDL3P58872 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.3■□□□□ 0.84
RHBDL3P58872 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RHBDL3P58872 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RHBDL3P58872 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.3■□□□□ 0.84
RHBDL3P58872 AC093520.2-201ENST00000561830 333 ntBASIC20.3■□□□□ 0.84
RHBDL3P58872 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RHBDL3P58872 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.3■□□□□ 0.84
RHBDL3P58872 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHBDL3P58872 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RHBDL3P58872 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.3■□□□□ 0.84
RHBDL3P58872 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.3■□□□□ 0.84
RHBDL3P58872 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.3■□□□□ 0.84
RHBDL3P58872 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RHBDL3P58872 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RHBDL3P58872 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHBDL3P58872 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHBDL3P58872 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.3■□□□□ 0.84
RHBDL3P58872 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHBDL3P58872 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHBDL3P58872 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.3■□□□□ 0.84
RHBDL3P58872 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RHBDL3P58872 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RHBDL3P58872 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RHBDL3P58872 AC116353.5-201ENST00000638148 1699 ntBASIC20.29■□□□□ 0.84
RHBDL3P58872 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.29■□□□□ 0.84
RHBDL3P58872 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms