Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH13P55290 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.97■□□□□ 0.31
CDH13P55290 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.97■□□□□ 0.31
CDH13P55290 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH13P55290 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH13P55290 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.97■□□□□ 0.31
CDH13P55290 LINC01238-205ENST00000567549 1107 ntBASIC16.97■□□□□ 0.31
CDH13P55290 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
CDH13P55290 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.97■□□□□ 0.31
CDH13P55290 AC011840.4-201ENST00000578471 627 ntBASIC16.97■□□□□ 0.31
CDH13P55290 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH13P55290 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH13P55290 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH13P55290 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH13P55290 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH13P55290 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH13P55290 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH13P55290 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH13P55290 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH13P55290 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH13P55290 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH13P55290 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH13P55290 KRT8P10-201ENST00000450021 1447 ntBASIC16.96■□□□□ 0.31
CDH13P55290 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH13P55290 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CDH13P55290 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH13P55290 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
CDH13P55290 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH13P55290 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH13P55290 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH13P55290 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH13P55290 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH13P55290 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH13P55290 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH13P55290 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH13P55290 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CDH13P55290 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH13P55290 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH13P55290 TMPOP1-202ENST00000424642 1267 ntBASIC16.96■□□□□ 0.31
CDH13P55290 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH13P55290 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH13P55290 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH13P55290 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH13P55290 AL136038.3-201ENST00000561909 1096 ntBASIC16.96■□□□□ 0.31
CDH13P55290 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH13P55290 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH13P55290 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH13P55290 AC090616.6-201ENST00000582640 721 ntBASIC16.96■□□□□ 0.31
CDH13P55290 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH13P55290 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH13P55290 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH13P55290 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH13P55290 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CDH13P55290 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH13P55290 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH13P55290 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH13P55290 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH13P55290 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH13P55290 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CDH13P55290 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.96■□□□□ 0.3
CDH13P55290 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.96■□□□□ 0.3
CDH13P55290 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
CDH13P55290 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH13P55290 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH13P55290 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH13P55290 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH13P55290 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CDH13P55290 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH13P55290 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH13P55290 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CDH13P55290 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH13P55290 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH13P55290 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CDH13P55290 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH13P55290 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH13P55290 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH13P55290 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CDH13P55290 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.95■□□□□ 0.3
CDH13P55290 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH13P55290 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CDH13P55290 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH13P55290 AC091607.1-201ENST00000490318 1060 ntBASIC16.95■□□□□ 0.3
CDH13P55290 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH13P55290 AC122714.2-201ENST00000502787 707 ntBASIC16.95■□□□□ 0.3
CDH13P55290 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.95■□□□□ 0.3
CDH13P55290 KRT8P26-201ENST00000534154 1276 ntBASIC16.95■□□□□ 0.3
CDH13P55290 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH13P55290 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH13P55290 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CDH13P55290 AC092068.3-201ENST00000587894 2016 ntBASIC16.95■□□□□ 0.3
CDH13P55290 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH13P55290 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CDH13P55290 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH13P55290 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CDH13P55290 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CDH13P55290 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CDH13P55290 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.95■□□□□ 0.3
CDH13P55290 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH13P55290 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH13P55290 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms