Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHA4P54764 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.66■□□□□ 0.26
EPHA4P54764 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.66■□□□□ 0.26
EPHA4P54764 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.66■□□□□ 0.26
EPHA4P54764 AC018470.1-201ENST00000624790 3129 ntBASIC16.65■□□□□ 0.26
EPHA4P54764 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.65■□□□□ 0.26
EPHA4P54764 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.65■□□□□ 0.26
EPHA4P54764 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA4P54764 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
EPHA4P54764 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
EPHA4P54764 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
EPHA4P54764 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.65■□□□□ 0.26
EPHA4P54764 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
EPHA4P54764 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA4P54764 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA4P54764 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA4P54764 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA4P54764 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA4P54764 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA4P54764 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA4P54764 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
EPHA4P54764 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.65■□□□□ 0.26
EPHA4P54764 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.65■□□□□ 0.26
EPHA4P54764 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
EPHA4P54764 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA4P54764 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.65■□□□□ 0.26
EPHA4P54764 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.65■□□□□ 0.26
EPHA4P54764 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.65■□□□□ 0.26
EPHA4P54764 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.65■□□□□ 0.26
EPHA4P54764 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA4P54764 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.65■□□□□ 0.26
EPHA4P54764 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA4P54764 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
EPHA4P54764 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA4P54764 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA4P54764 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA4P54764 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHA4P54764 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.26
EPHA4P54764 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
EPHA4P54764 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
EPHA4P54764 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.64■□□□□ 0.25
EPHA4P54764 PRORSD1P-202ENST00000563365 2154 ntBASIC16.64■□□□□ 0.25
EPHA4P54764 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA4P54764 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA4P54764 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
EPHA4P54764 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
EPHA4P54764 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA4P54764 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA4P54764 IGLL3P-201ENST00000412472 434 ntBASIC16.64■□□□□ 0.25
EPHA4P54764 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.64■□□□□ 0.25
EPHA4P54764 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.64■□□□□ 0.25
EPHA4P54764 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.64■□□□□ 0.25
EPHA4P54764 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.64■□□□□ 0.25
EPHA4P54764 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.64■□□□□ 0.25
EPHA4P54764 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA4P54764 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.64■□□□□ 0.25
EPHA4P54764 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
EPHA4P54764 OR7E47P-204ENST00000575924 449 ntBASIC16.64■□□□□ 0.25
EPHA4P54764 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.64■□□□□ 0.25
EPHA4P54764 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA4P54764 AC133963.1-201ENST00000504166 1679 ntBASIC16.64■□□□□ 0.25
EPHA4P54764 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.64■□□□□ 0.25
EPHA4P54764 AC068880.1-201ENST00000507289 2297 ntBASIC16.64■□□□□ 0.25
EPHA4P54764 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA4P54764 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA4P54764 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.64■□□□□ 0.25
EPHA4P54764 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA4P54764 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
EPHA4P54764 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA4P54764 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHA4P54764 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHA4P54764 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.63■□□□□ 0.25
EPHA4P54764 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
EPHA4P54764 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHA4P54764 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
EPHA4P54764 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHA4P54764 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.63■□□□□ 0.25
EPHA4P54764 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EPHA4P54764 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.63■□□□□ 0.25
EPHA4P54764 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHA4P54764 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHA4P54764 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
EPHA4P54764 AC112482.1-201ENST00000492080 688 ntBASIC16.63■□□□□ 0.25
EPHA4P54764 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.63■□□□□ 0.25
EPHA4P54764 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.63■□□□□ 0.25
EPHA4P54764 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.63■□□□□ 0.25
EPHA4P54764 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.63■□□□□ 0.25
EPHA4P54764 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.63■□□□□ 0.25
EPHA4P54764 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.63■□□□□ 0.25
EPHA4P54764 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
EPHA4P54764 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.63■□□□□ 0.25
EPHA4P54764 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHA4P54764 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHA4P54764 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHA4P54764 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.63■□□□□ 0.25
EPHA4P54764 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHA4P54764 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHA4P54764 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
EPHA4P54764 LYSMD4-203ENST00000378904 2122 ntBASIC16.63■□□□□ 0.25
EPHA4P54764 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms