Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA4P43681 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNA4P43681 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNA4P43681 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA4P43681 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA4P43681 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CHRNA4P43681 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA4P43681 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.48■□□□□ 0.39
CHRNA4P43681 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA4P43681 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.48■□□□□ 0.39
CHRNA4P43681 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA4P43681 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA4P43681 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CHRNA4P43681 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA4P43681 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA4P43681 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA4P43681 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNA4P43681 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA4P43681 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA4P43681 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA4P43681 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CHRNA4P43681 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNA4P43681 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA4P43681 DUSP5P1-201ENST00000441325 1139 ntBASIC17.48■□□□□ 0.39
CHRNA4P43681 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA4P43681 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNA4P43681 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.48■□□□□ 0.39
CHRNA4P43681 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.48■□□□□ 0.39
CHRNA4P43681 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.48■□□□□ 0.39
CHRNA4P43681 IFNL4P1-201ENST00000607083 540 ntBASIC17.48■□□□□ 0.39
CHRNA4P43681 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA4P43681 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.48■□□□□ 0.39
CHRNA4P43681 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA4P43681 AC073592.4-201ENST00000623827 446 ntBASIC17.48■□□□□ 0.39
CHRNA4P43681 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA4P43681 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA4P43681 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CHRNA4P43681 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CHRNA4P43681 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CHRNA4P43681 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNA4P43681 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA4P43681 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA4P43681 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA4P43681 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA4P43681 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA4P43681 SIGLEC16-201ENST00000599858 1437 ntBASIC17.47■□□□□ 0.39
CHRNA4P43681 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA4P43681 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CHRNA4P43681 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA4P43681 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA4P43681 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHRNA4P43681 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA4P43681 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA4P43681 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA4P43681 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA4P43681 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA4P43681 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA4P43681 SIGLEC30P-201ENST00000455569 941 ntBASIC17.47■□□□□ 0.39
CHRNA4P43681 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.47■□□□□ 0.39
CHRNA4P43681 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.47■□□□□ 0.39
CHRNA4P43681 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.47■□□□□ 0.39
CHRNA4P43681 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.47■□□□□ 0.39
CHRNA4P43681 MTDHP3-201ENST00000594186 672 ntBASIC17.47■□□□□ 0.39
CHRNA4P43681 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHRNA4P43681 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA4P43681 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHRNA4P43681 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA4P43681 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
CHRNA4P43681 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA4P43681 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHRNA4P43681 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA4P43681 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA4P43681 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA4P43681 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA4P43681 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA4P43681 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA4P43681 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA4P43681 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CHRNA4P43681 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA4P43681 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CHRNA4P43681 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.46■□□□□ 0.39
CHRNA4P43681 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA4P43681 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA4P43681 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA4P43681 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA4P43681 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CHRNA4P43681 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA4P43681 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA4P43681 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA4P43681 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA4P43681 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA4P43681 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.46■□□□□ 0.39
CHRNA4P43681 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.46■□□□□ 0.39
CHRNA4P43681 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.46■□□□□ 0.39
CHRNA4P43681 NKAPP1-205ENST00000585790 367 ntBASIC17.46■□□□□ 0.39
CHRNA4P43681 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.46■□□□□ 0.39
CHRNA4P43681 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CHRNA4P43681 REXO1L6P-202ENST00000619970 1078 ntBASIC17.46■□□□□ 0.39
CHRNA4P43681 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA4P43681 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms