Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.08■□□□□ 0.49
MTHFRP42898 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.08■□□□□ 0.49
MTHFRP42898 AL590787.1-201ENST00000568856 1315 ntBASIC18.08■□□□□ 0.49
MTHFRP42898 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
MTHFRP42898 AL133373.2-201ENST00000623187 2828 ntBASIC18.08■□□□□ 0.48
MTHFRP42898 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
MTHFRP42898 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MTHFRP42898 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MTHFRP42898 PMS2P4-201ENST00000412466 1052 ntBASIC18.08■□□□□ 0.48
MTHFRP42898 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.08■□□□□ 0.48
MTHFRP42898 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.08■□□□□ 0.48
MTHFRP42898 AC069262.1-201ENST00000539058 672 ntBASIC18.08■□□□□ 0.48
MTHFRP42898 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.08■□□□□ 0.48
MTHFRP42898 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.08■□□□□ 0.48
MTHFRP42898 AC009093.7-201ENST00000623853 1223 ntBASIC18.08■□□□□ 0.48
MTHFRP42898 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.08■□□□□ 0.48
MTHFRP42898 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
MTHFRP42898 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
MTHFRP42898 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MTHFRP42898 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.08■□□□□ 0.48
MTHFRP42898 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.08■□□□□ 0.48
MTHFRP42898 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.08■□□□□ 0.48
MTHFRP42898 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MTHFRP42898 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
MTHFRP42898 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
MTHFRP42898 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
MTHFRP42898 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
MTHFRP42898 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MTHFRP42898 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MTHFRP42898 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MTHFRP42898 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MTHFRP42898 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MTHFRP42898 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.07■□□□□ 0.48
MTHFRP42898 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MTHFRP42898 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.07■□□□□ 0.48
MTHFRP42898 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.07■□□□□ 0.48
MTHFRP42898 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.07■□□□□ 0.48
MTHFRP42898 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MTHFRP42898 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MTHFRP42898 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MTHFRP42898 AL627223.1-201ENST00000416693 442 ntBASIC18.07■□□□□ 0.48
MTHFRP42898 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.07■□□□□ 0.48
MTHFRP42898 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
MTHFRP42898 TIMM8BP1-201ENST00000452384 211 ntBASIC18.07■□□□□ 0.48
MTHFRP42898 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.07■□□□□ 0.48
MTHFRP42898 FAM86C2P-203ENST00000528684 1004 ntBASIC18.07■□□□□ 0.48
MTHFRP42898 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MTHFRP42898 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.07■□□□□ 0.48
MTHFRP42898 AC026120.1-201ENST00000611536 926 ntBASIC18.07■□□□□ 0.48
MTHFRP42898 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.07■□□□□ 0.48
MTHFRP42898 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.07■□□□□ 0.48
MTHFRP42898 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MTHFRP42898 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MTHFRP42898 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MTHFRP42898 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.07■□□□□ 0.48
MTHFRP42898 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MTHFRP42898 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MTHFRP42898 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.07■□□□□ 0.48
MTHFRP42898 AC073592.3-201ENST00000625118 1834 ntBASIC18.07■□□□□ 0.48
MTHFRP42898 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
MTHFRP42898 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MTHFRP42898 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.07■□□□□ 0.48
MTHFRP42898 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.07■□□□□ 0.48
MTHFRP42898 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MTHFRP42898 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.06■□□□□ 0.48
MTHFRP42898 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MTHFRP42898 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MTHFRP42898 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
MTHFRP42898 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MTHFRP42898 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
MTHFRP42898 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MTHFRP42898 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
MTHFRP42898 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.06■□□□□ 0.48
MTHFRP42898 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.06■□□□□ 0.48
MTHFRP42898 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.06■□□□□ 0.48
MTHFRP42898 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.06■□□□□ 0.48
MTHFRP42898 ADH5P3-201ENST00000433842 1137 ntBASIC18.06■□□□□ 0.48
MTHFRP42898 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.06■□□□□ 0.48
MTHFRP42898 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.06■□□□□ 0.48
MTHFRP42898 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MTHFRP42898 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MTHFRP42898 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.06■□□□□ 0.48
MTHFRP42898 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MTHFRP42898 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
MTHFRP42898 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MTHFRP42898 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
MTHFRP42898 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MTHFRP42898 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MTHFRP42898 AC092919.2-201ENST00000623631 1645 ntBASIC18.05■□□□□ 0.48
MTHFRP42898 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MTHFRP42898 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MTHFRP42898 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MTHFRP42898 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.05■□□□□ 0.48
MTHFRP42898 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MTHFRP42898 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MTHFRP42898 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MTHFRP42898 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MTHFRP42898 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.05■□□□□ 0.48
MTHFRP42898 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MTHFRP42898 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms