Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.67■□□□□ 0.1
APOBEC1P41238 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOBEC1P41238 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
APOBEC1P41238 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOBEC1P41238 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
APOBEC1P41238 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOBEC1P41238 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
APOBEC1P41238 AC097637.2-201ENST00000624096 1997 ntBASIC15.67■□□□□ 0.1
APOBEC1P41238 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOBEC1P41238 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
APOBEC1P41238 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.67■□□□□ 0.1
APOBEC1P41238 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOBEC1P41238 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.67■□□□□ 0.1
APOBEC1P41238 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.67■□□□□ 0.1
APOBEC1P41238 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
APOBEC1P41238 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
APOBEC1P41238 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
APOBEC1P41238 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
APOBEC1P41238 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
APOBEC1P41238 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOBEC1P41238 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.66■□□□□ 0.1
APOBEC1P41238 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOBEC1P41238 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOBEC1P41238 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
APOBEC1P41238 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOBEC1P41238 AKR1C7P-201ENST00000305623 895 ntBASIC15.66■□□□□ 0.1
APOBEC1P41238 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.66■□□□□ 0.1
APOBEC1P41238 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.66■□□□□ 0.1
APOBEC1P41238 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
APOBEC1P41238 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
APOBEC1P41238 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
APOBEC1P41238 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
APOBEC1P41238 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.66■□□□□ 0.1
APOBEC1P41238 DUSP5P1-201ENST00000441325 1139 ntBASIC15.66■□□□□ 0.1
APOBEC1P41238 BX005266.1-201ENST00000473402 457 ntBASIC15.66■□□□□ 0.1
APOBEC1P41238 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOBEC1P41238 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.66■□□□□ 0.1
APOBEC1P41238 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.66■□□□□ 0.1
APOBEC1P41238 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
APOBEC1P41238 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
APOBEC1P41238 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOBEC1P41238 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOBEC1P41238 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
APOBEC1P41238 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.66■□□□□ 0.1
APOBEC1P41238 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
APOBEC1P41238 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.66■□□□□ 0.1
APOBEC1P41238 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
APOBEC1P41238 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOBEC1P41238 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
APOBEC1P41238 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.66■□□□□ 0.1
APOBEC1P41238 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
APOBEC1P41238 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
APOBEC1P41238 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
APOBEC1P41238 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.66■□□□□ 0.1
APOBEC1P41238 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
APOBEC1P41238 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOBEC1P41238 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
APOBEC1P41238 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOBEC1P41238 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOBEC1P41238 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
APOBEC1P41238 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOBEC1P41238 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOBEC1P41238 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
APOBEC1P41238 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOBEC1P41238 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.65■□□□□ 0.1
APOBEC1P41238 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
APOBEC1P41238 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
APOBEC1P41238 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.65■□□□□ 0.1
APOBEC1P41238 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOBEC1P41238 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
APOBEC1P41238 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.65■□□□□ 0.1
APOBEC1P41238 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOBEC1P41238 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.65■□□□□ 0.1
APOBEC1P41238 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.65■□□□□ 0.1
APOBEC1P41238 AF238378.1-201ENST00000526806 358 ntBASIC15.65■□□□□ 0.1
APOBEC1P41238 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.65■□□□□ 0.1
APOBEC1P41238 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
APOBEC1P41238 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.65■□□□□ 0.1
APOBEC1P41238 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.65■□□□□ 0.1
APOBEC1P41238 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
APOBEC1P41238 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.65■□□□□ 0.1
APOBEC1P41238 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.65■□□□□ 0.1
APOBEC1P41238 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOBEC1P41238 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
APOBEC1P41238 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
APOBEC1P41238 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.65■□□□□ 0.1
APOBEC1P41238 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.65■□□□□ 0.1
APOBEC1P41238 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.65■□□□□ 0.1
APOBEC1P41238 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOBEC1P41238 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOBEC1P41238 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOBEC1P41238 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
APOBEC1P41238 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.65■□□□□ 0.1
APOBEC1P41238 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.65■□□□□ 0.1
APOBEC1P41238 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.65■□□□□ 0.1
APOBEC1P41238 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOBEC1P41238 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOBEC1P41238 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
APOBEC1P41238 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.1
APOBEC1P41238 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms