Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CLCN1P35523 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN1P35523 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN1P35523 AC078925.2-201ENST00000624013 1973 ntBASIC19.74■□□□□ 0.75
CLCN1P35523 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN1P35523 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.73■□□□□ 0.75
CLCN1P35523 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.73■□□□□ 0.75
CLCN1P35523 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN1P35523 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN1P35523 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.73■□□□□ 0.75
CLCN1P35523 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN1P35523 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CLCN1P35523 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.73■□□□□ 0.75
CLCN1P35523 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN1P35523 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN1P35523 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.73■□□□□ 0.75
CLCN1P35523 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN1P35523 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN1P35523 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN1P35523 AL163051.1-201ENST00000569214 1512 ntBASIC19.73■□□□□ 0.75
CLCN1P35523 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN1P35523 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN1P35523 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN1P35523 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN1P35523 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN1P35523 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CLCN1P35523 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.73■□□□□ 0.75
CLCN1P35523 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN1P35523 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.73■□□□□ 0.75
CLCN1P35523 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.73■□□□□ 0.75
CLCN1P35523 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.73■□□□□ 0.75
CLCN1P35523 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.73■□□□□ 0.75
CLCN1P35523 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN1P35523 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CLCN1P35523 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN1P35523 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN1P35523 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.73■□□□□ 0.75
CLCN1P35523 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN1P35523 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.73■□□□□ 0.75
CLCN1P35523 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN1P35523 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.72■□□□□ 0.75
CLCN1P35523 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN1P35523 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN1P35523 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN1P35523 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC19.72■□□□□ 0.75
CLCN1P35523 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCN1P35523 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN1P35523 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
CLCN1P35523 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN1P35523 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
CLCN1P35523 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN1P35523 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN1P35523 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCN1P35523 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCN1P35523 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CLCN1P35523 SDHAP2-201ENST00000455183 2001 ntBASIC19.72■□□□□ 0.75
CLCN1P35523 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.72■□□□□ 0.75
CLCN1P35523 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN1P35523 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CLCN1P35523 KRT8P7-201ENST00000533003 1432 ntBASIC19.72■□□□□ 0.75
CLCN1P35523 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCN1P35523 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.72■□□□□ 0.75
CLCN1P35523 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCN1P35523 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.72■□□□□ 0.75
CLCN1P35523 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCN1P35523 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.72■□□□□ 0.75
CLCN1P35523 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN1P35523 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.72■□□□□ 0.75
CLCN1P35523 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN1P35523 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN1P35523 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN1P35523 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN1P35523 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN1P35523 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN1P35523 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN1P35523 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN1P35523 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CLCN1P35523 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN1P35523 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN1P35523 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CLCN1P35523 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN1P35523 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN1P35523 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN1P35523 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CLCN1P35523 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.71■□□□□ 0.75
CLCN1P35523 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.71■□□□□ 0.75
CLCN1P35523 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.71■□□□□ 0.75
CLCN1P35523 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.71■□□□□ 0.75
CLCN1P35523 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN1P35523 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN1P35523 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CLCN1P35523 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN1P35523 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN1P35523 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN1P35523 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN1P35523 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN1P35523 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN1P35523 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN1P35523 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN1P35523 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms