Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
HOXC8P31273 MIR3909-201ENST00000579518 119 ntBASIC18.73■□□□□ 0.59
HOXC8P31273 Z92544.3-201ENST00000624747 417 ntBASIC18.73■□□□□ 0.59
HOXC8P31273 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC8P31273 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.73■□□□□ 0.59
HOXC8P31273 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC8P31273 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.73■□□□□ 0.59
HOXC8P31273 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC8P31273 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.73■□□□□ 0.59
HOXC8P31273 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.73■□□□□ 0.59
HOXC8P31273 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC8P31273 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC8P31273 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.73■□□□□ 0.59
HOXC8P31273 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC8P31273 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC8P31273 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HOXC8P31273 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HOXC8P31273 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HOXC8P31273 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HOXC8P31273 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.72■□□□□ 0.59
HOXC8P31273 TOP3BP1-201ENST00000420768 1380 ntBASIC18.72■□□□□ 0.59
HOXC8P31273 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HOXC8P31273 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HOXC8P31273 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.72■□□□□ 0.59
HOXC8P31273 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HOXC8P31273 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HOXC8P31273 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.72■□□□□ 0.59
HOXC8P31273 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HOXC8P31273 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HOXC8P31273 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.72■□□□□ 0.59
HOXC8P31273 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.72■□□□□ 0.59
HOXC8P31273 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.72■□□□□ 0.59
HOXC8P31273 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.72■□□□□ 0.59
HOXC8P31273 AC091167.2-201ENST00000579581 588 ntBASIC18.72■□□□□ 0.59
HOXC8P31273 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HOXC8P31273 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
HOXC8P31273 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.72■□□□□ 0.59
HOXC8P31273 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.72■□□□□ 0.59
HOXC8P31273 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HOXC8P31273 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HOXC8P31273 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.71■□□□□ 0.59
HOXC8P31273 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC8P31273 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.71■□□□□ 0.59
HOXC8P31273 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
HOXC8P31273 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC8P31273 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
HOXC8P31273 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC8P31273 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC8P31273 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HOXC8P31273 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC8P31273 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC8P31273 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
HOXC8P31273 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC8P31273 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.71■□□□□ 0.59
HOXC8P31273 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.71■□□□□ 0.59
HOXC8P31273 FAM86GP-201ENST00000448322 971 ntBASIC18.71■□□□□ 0.59
HOXC8P31273 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.71■□□□□ 0.59
HOXC8P31273 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC8P31273 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC8P31273 AC067863.1-201ENST00000494933 530 ntBASIC18.71■□□□□ 0.59
HOXC8P31273 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.71■□□□□ 0.59
HOXC8P31273 KRT8P23-201ENST00000560090 1207 ntBASIC18.71■□□□□ 0.59
HOXC8P31273 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC8P31273 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC8P31273 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC8P31273 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.71■□□□□ 0.59
HOXC8P31273 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC8P31273 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC8P31273 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC8P31273 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC8P31273 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.71■□□□□ 0.59
HOXC8P31273 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.71■□□□□ 0.59
HOXC8P31273 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC8P31273 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.71■□□□□ 0.59
HOXC8P31273 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC8P31273 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
HOXC8P31273 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
HOXC8P31273 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.7■□□□□ 0.58
HOXC8P31273 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.7■□□□□ 0.58
HOXC8P31273 AC008764.6-201ENST00000595909 2069 ntBASIC18.7■□□□□ 0.58
HOXC8P31273 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HOXC8P31273 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.7■□□□□ 0.58
HOXC8P31273 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.7■□□□□ 0.58
HOXC8P31273 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC8P31273 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC8P31273 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC8P31273 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HOXC8P31273 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC8P31273 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.7■□□□□ 0.58
HOXC8P31273 RNU1-129P-201ENST00000384064 167 ntBASIC18.7■□□□□ 0.58
HOXC8P31273 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.7■□□□□ 0.58
HOXC8P31273 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.7■□□□□ 0.58
HOXC8P31273 KRT18P32-201ENST00000424695 1287 ntBASIC18.7■□□□□ 0.58
HOXC8P31273 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC8P31273 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.7■□□□□ 0.58
HOXC8P31273 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HOXC8P31273 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.7■□□□□ 0.58
HOXC8P31273 AC016396.2-201ENST00000562575 1417 ntBASIC18.7■□□□□ 0.58
HOXC8P31273 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC8P31273 U1.21-201ENST00000580816 167 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms