Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACKR3P25106 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.09■□□□□ 0.01
ACKR3P25106 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
ACKR3P25106 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ACKR3P25106 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.09■□□□□ 0.01
ACKR3P25106 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACKR3P25106 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ACKR3P25106 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ACKR3P25106 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACKR3P25106 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
ACKR3P25106 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
ACKR3P25106 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACKR3P25106 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACKR3P25106 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.09■□□□□ 0.01
ACKR3P25106 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.09■□□□□ 0.01
ACKR3P25106 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.09■□□□□ 0.01
ACKR3P25106 AC122714.2-201ENST00000502787 707 ntBASIC15.09■□□□□ 0.01
ACKR3P25106 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.09■□□□□ 0.01
ACKR3P25106 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ACKR3P25106 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.09■□□□□ 0.01
ACKR3P25106 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.09■□□□□ 0.01
ACKR3P25106 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.09■□□□□ 0.01
ACKR3P25106 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.09■□□□□ 0.01
ACKR3P25106 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.09■□□□□ 0.01
ACKR3P25106 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ACKR3P25106 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACKR3P25106 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.09■□□□□ 0.01
ACKR3P25106 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACKR3P25106 AL049757.1-201ENST00000616842 1596 ntBASIC15.09■□□□□ 0.01
ACKR3P25106 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACKR3P25106 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACKR3P25106 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.09■□□□□ 0.01
ACKR3P25106 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACKR3P25106 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACKR3P25106 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.09■□□□□ 0.01
ACKR3P25106 AC116353.5-201ENST00000638148 1699 ntBASIC15.09■□□□□ 0.01
ACKR3P25106 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACKR3P25106 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACKR3P25106 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACKR3P25106 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACKR3P25106 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ACKR3P25106 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.09■□□□□ 0.01
ACKR3P25106 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ACKR3P25106 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
ACKR3P25106 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
ACKR3P25106 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
ACKR3P25106 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ACKR3P25106 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ACKR3P25106 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ACKR3P25106 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.08■□□□□ 0
ACKR3P25106 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.08■□□□□ 0
ACKR3P25106 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ACKR3P25106 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
ACKR3P25106 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.08■□□□□ 0
ACKR3P25106 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
ACKR3P25106 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ACKR3P25106 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ACKR3P25106 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ACKR3P25106 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ACKR3P25106 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.08■□□□□ 0
ACKR3P25106 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.08■□□□□ 0
ACKR3P25106 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.08■□□□□ 0
ACKR3P25106 TSSC2-201ENST00000450217 709 ntBASIC15.08■□□□□ 0
ACKR3P25106 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.08■□□□□ 0
ACKR3P25106 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.08■□□□□ 0
ACKR3P25106 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.08■□□□□ 0
ACKR3P25106 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.08■□□□□ 0
ACKR3P25106 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.08■□□□□ 0
ACKR3P25106 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ACKR3P25106 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ACKR3P25106 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
ACKR3P25106 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
ACKR3P25106 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.08■□□□□ 0
ACKR3P25106 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.08■□□□□ 0
ACKR3P25106 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.08■□□□□ 0
ACKR3P25106 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ACKR3P25106 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.08■□□□□ 0
ACKR3P25106 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
ACKR3P25106 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ACKR3P25106 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ACKR3P25106 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.07■□□□□ 0
ACKR3P25106 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ACKR3P25106 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ACKR3P25106 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.07■□□□□ 0
ACKR3P25106 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
ACKR3P25106 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
ACKR3P25106 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ACKR3P25106 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.07■□□□□ 0
ACKR3P25106 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ACKR3P25106 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.07■□□□□ 0
ACKR3P25106 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ACKR3P25106 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
ACKR3P25106 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.07■□□□□ 0
ACKR3P25106 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.07■□□□□ 0
ACKR3P25106 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
ACKR3P25106 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.07■□□□□ 0
ACKR3P25106 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.07■□□□□ 0
ACKR3P25106 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.07■□□□□ 0
ACKR3P25106 FAM220CP-201ENST00000395253 831 ntBASIC15.07■□□□□ 0
ACKR3P25106 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms