Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
HLA-DPA1P20036 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DPA1P20036 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.51■□□□□ 0.39
HLA-DPA1P20036 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DPA1P20036 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DPA1P20036 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
HLA-DPA1P20036 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.51■□□□□ 0.39
HLA-DPA1P20036 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
HLA-DPA1P20036 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.51■□□□□ 0.39
HLA-DPA1P20036 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DPA1P20036 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 AC093525.9-201ENST00000624961 1746 ntBASIC17.5■□□□□ 0.39
HLA-DPA1P20036 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 LINC01711-201ENST00000598340 967 ntBASIC17.5■□□□□ 0.39
HLA-DPA1P20036 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPA1P20036 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 SLC25A1P3-201ENST00000395415 828 ntBASIC17.49■□□□□ 0.39
HLA-DPA1P20036 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 AC148477.5-201ENST00000625164 1645 ntBASIC17.49■□□□□ 0.39
HLA-DPA1P20036 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPA1P20036 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 AC020916.1-201ENST00000587762 1774 ntBASIC17.48■□□□□ 0.39
HLA-DPA1P20036 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HLA-DPA1P20036 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms