Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.64■□□□□ 0.41
NFKB1P19838 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NFKB1P19838 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NFKB1P19838 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NFKB1P19838 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
NFKB1P19838 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NFKB1P19838 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NFKB1P19838 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NFKB1P19838 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKB1P19838 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKB1P19838 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.63■□□□□ 0.41
NFKB1P19838 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.63■□□□□ 0.41
NFKB1P19838 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.63■□□□□ 0.41
NFKB1P19838 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.63■□□□□ 0.41
NFKB1P19838 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKB1P19838 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NFKB1P19838 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKB1P19838 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.63■□□□□ 0.41
NFKB1P19838 AL020989.1-201ENST00000422979 469 ntBASIC17.63■□□□□ 0.41
NFKB1P19838 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
NFKB1P19838 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.63■□□□□ 0.41
NFKB1P19838 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.63■□□□□ 0.41
NFKB1P19838 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.63■□□□□ 0.41
NFKB1P19838 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NFKB1P19838 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NFKB1P19838 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKB1P19838 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.63■□□□□ 0.41
NFKB1P19838 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.63■□□□□ 0.41
NFKB1P19838 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NFKB1P19838 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKB1P19838 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.63■□□□□ 0.41
NFKB1P19838 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKB1P19838 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKB1P19838 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NFKB1P19838 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
NFKB1P19838 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NFKB1P19838 AD000864.1-201ENST00000624076 2295 ntBASIC17.63■□□□□ 0.41
NFKB1P19838 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKB1P19838 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NFKB1P19838 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKB1P19838 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NFKB1P19838 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.62■□□□□ 0.41
NFKB1P19838 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NFKB1P19838 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NFKB1P19838 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NFKB1P19838 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NFKB1P19838 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.62■□□□□ 0.41
NFKB1P19838 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NFKB1P19838 PRORSD1P-202ENST00000563365 2154 ntBASIC17.62■□□□□ 0.41
NFKB1P19838 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NFKB1P19838 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NFKB1P19838 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NFKB1P19838 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NFKB1P19838 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.62■□□□□ 0.41
NFKB1P19838 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NFKB1P19838 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NFKB1P19838 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.62■□□□□ 0.41
NFKB1P19838 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.62■□□□□ 0.41
NFKB1P19838 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.62■□□□□ 0.41
NFKB1P19838 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.62■□□□□ 0.41
NFKB1P19838 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.62■□□□□ 0.41
NFKB1P19838 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.62■□□□□ 0.41
NFKB1P19838 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NFKB1P19838 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NFKB1P19838 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NFKB1P19838 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NFKB1P19838 AC092053.1-201ENST00000605787 1936 ntBASIC17.62■□□□□ 0.41
NFKB1P19838 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NFKB1P19838 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NFKB1P19838 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NFKB1P19838 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
NFKB1P19838 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NFKB1P19838 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
NFKB1P19838 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NFKB1P19838 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NFKB1P19838 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NFKB1P19838 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NFKB1P19838 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
NFKB1P19838 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NFKB1P19838 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NFKB1P19838 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NFKB1P19838 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NFKB1P19838 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NFKB1P19838 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NFKB1P19838 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
NFKB1P19838 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.61■□□□□ 0.41
NFKB1P19838 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NFKB1P19838 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NFKB1P19838 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.61■□□□□ 0.41
NFKB1P19838 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.61■□□□□ 0.41
NFKB1P19838 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NFKB1P19838 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.61■□□□□ 0.41
NFKB1P19838 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.61■□□□□ 0.41
NFKB1P19838 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NFKB1P19838 SIGLEC30P-201ENST00000455569 941 ntBASIC17.61■□□□□ 0.41
NFKB1P19838 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.61■□□□□ 0.41
NFKB1P19838 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.61■□□□□ 0.41
NFKB1P19838 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.61■□□□□ 0.41
NFKB1P19838 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.61■□□□□ 0.41
NFKB1P19838 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms