Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.27■□□□□ 0.2
CCL4P13236 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.27■□□□□ 0.2
CCL4P13236 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL4P13236 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL4P13236 AC012317.2-201ENST00000623305 2251 ntBASIC16.27■□□□□ 0.2
CCL4P13236 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCL4P13236 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.27■□□□□ 0.19
CCL4P13236 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.27■□□□□ 0.19
CCL4P13236 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCL4P13236 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.27■□□□□ 0.19
CCL4P13236 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.27■□□□□ 0.19
CCL4P13236 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCL4P13236 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.27■□□□□ 0.19
CCL4P13236 LYSMD4-203ENST00000378904 2122 ntBASIC16.27■□□□□ 0.19
CCL4P13236 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.27■□□□□ 0.19
CCL4P13236 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CCL4P13236 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CCL4P13236 LINC00304-203ENST00000565008 1864 ntBASIC16.27■□□□□ 0.19
CCL4P13236 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CCL4P13236 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.27■□□□□ 0.19
CCL4P13236 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL4P13236 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL4P13236 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL4P13236 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL4P13236 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL4P13236 HTR7P1-202ENST00000624664 4411 ntBASIC16.26■□□□□ 0.19
CCL4P13236 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCL4P13236 BICD1-207ENST00000551848 1962 ntBASIC16.26■□□□□ 0.19
CCL4P13236 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL4P13236 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
CCL4P13236 HCG11-201ENST00000411553 5696 ntBASIC16.26■□□□□ 0.19
CCL4P13236 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
CCL4P13236 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL4P13236 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL4P13236 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CCL4P13236 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL4P13236 AL671277.1-201ENST00000429656 993 ntBASIC16.26■□□□□ 0.19
CCL4P13236 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL4P13236 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.26■□□□□ 0.19
CCL4P13236 AC093520.2-201ENST00000561830 333 ntBASIC16.26■□□□□ 0.19
CCL4P13236 AC025678.2-201ENST00000562061 970 ntBASIC16.26■□□□□ 0.19
CCL4P13236 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CCL4P13236 AC099522.2-201ENST00000607001 744 ntBASIC16.26■□□□□ 0.19
CCL4P13236 AC026120.1-201ENST00000611536 926 ntBASIC16.26■□□□□ 0.19
CCL4P13236 LINC00628-201ENST00000628516 1289 ntBASIC16.26■□□□□ 0.19
CCL4P13236 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL4P13236 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL4P13236 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCL4P13236 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.26■□□□□ 0.19
CCL4P13236 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL4P13236 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.26■□□□□ 0.19
CCL4P13236 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL4P13236 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL4P13236 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCL4P13236 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL4P13236 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CCL4P13236 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CCL4P13236 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL4P13236 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL4P13236 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL4P13236 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL4P13236 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL4P13236 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL4P13236 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL4P13236 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL4P13236 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL4P13236 AL355306.1-201ENST00000415580 579 ntBASIC16.25■□□□□ 0.19
CCL4P13236 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CCL4P13236 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CCL4P13236 KRT8P48-201ENST00000515599 1220 ntBASIC16.25■□□□□ 0.19
CCL4P13236 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.25■□□□□ 0.19
CCL4P13236 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL4P13236 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL4P13236 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL4P13236 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL4P13236 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL4P13236 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL4P13236 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CCL4P13236 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL4P13236 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCL4P13236 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL4P13236 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL4P13236 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL4P13236 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.25■□□□□ 0.19
CCL4P13236 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.24■□□□□ 0.19
CCL4P13236 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.24■□□□□ 0.19
CCL4P13236 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.24■□□□□ 0.19
CCL4P13236 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CCL4P13236 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL4P13236 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL4P13236 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL4P13236 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.24■□□□□ 0.19
CCL4P13236 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CCL4P13236 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCL4P13236 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.24■□□□□ 0.19
CCL4P13236 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCL4P13236 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCL4P13236 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL4P13236 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL4P13236 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms