Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CD48P09326 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CD48P09326 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CD48P09326 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD48P09326 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CD48P09326 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CD48P09326 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CD48P09326 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD48P09326 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.96■□□□□ 0.47
CD48P09326 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD48P09326 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.96■□□□□ 0.47
CD48P09326 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.96■□□□□ 0.47
CD48P09326 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CD48P09326 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.96■□□□□ 0.47
CD48P09326 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CD48P09326 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD48P09326 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD48P09326 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD48P09326 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CD48P09326 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CD48P09326 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD48P09326 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD48P09326 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CD48P09326 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD48P09326 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD48P09326 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.96■□□□□ 0.47
CD48P09326 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD48P09326 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD48P09326 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.96■□□□□ 0.47
CD48P09326 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
CD48P09326 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CD48P09326 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
CD48P09326 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.95■□□□□ 0.46
CD48P09326 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CD48P09326 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.95■□□□□ 0.46
CD48P09326 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD48P09326 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.95■□□□□ 0.46
CD48P09326 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.95■□□□□ 0.46
CD48P09326 AC004817.3-201ENST00000602957 2129 ntBASIC17.95■□□□□ 0.46
CD48P09326 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD48P09326 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD48P09326 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.95■□□□□ 0.46
CD48P09326 SPDYE21P-201ENST00000413323 827 ntBASIC17.95■□□□□ 0.46
CD48P09326 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.95■□□□□ 0.46
CD48P09326 HCG4P8-203ENST00000443049 980 ntBASIC17.95■□□□□ 0.46
CD48P09326 ABCD1P5-201ENST00000445663 754 ntBASIC17.95■□□□□ 0.46
CD48P09326 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.95■□□□□ 0.46
CD48P09326 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.95■□□□□ 0.46
CD48P09326 AL591684.3-201ENST00000605187 298 ntBASIC17.95■□□□□ 0.46
CD48P09326 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
CD48P09326 AP001269.4-201ENST00000609611 512 ntBASIC17.95■□□□□ 0.46
CD48P09326 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.95■□□□□ 0.46
CD48P09326 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CD48P09326 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CD48P09326 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CD48P09326 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CD48P09326 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD48P09326 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CD48P09326 AC124067.4-201ENST00000519691 2379 ntBASIC17.95■□□□□ 0.46
CD48P09326 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CD48P09326 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CD48P09326 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD48P09326 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
CD48P09326 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CD48P09326 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CD48P09326 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CD48P09326 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD48P09326 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD48P09326 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.94■□□□□ 0.46
CD48P09326 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD48P09326 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CD48P09326 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.94■□□□□ 0.46
CD48P09326 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CD48P09326 AGGF1P2-201ENST00000426656 2106 ntBASIC17.94■□□□□ 0.46
CD48P09326 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CD48P09326 AC132008.2-207ENST00000454517 770 ntBASIC17.94■□□□□ 0.46
CD48P09326 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.94■□□□□ 0.46
CD48P09326 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.94■□□□□ 0.46
CD48P09326 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.94■□□□□ 0.46
CD48P09326 AL732292.2-201ENST00000609649 430 ntBASIC17.94■□□□□ 0.46
CD48P09326 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CD48P09326 EGFEM1P-202ENST00000431685 1563 ntBASIC17.94■□□□□ 0.46
CD48P09326 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CD48P09326 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD48P09326 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD48P09326 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD48P09326 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD48P09326 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD48P09326 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CD48P09326 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD48P09326 AC105020.1-201ENST00000435356 2205 ntBASIC17.94■□□□□ 0.46
CD48P09326 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD48P09326 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD48P09326 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.93■□□□□ 0.46
CD48P09326 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.93■□□□□ 0.46
CD48P09326 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
CD48P09326 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
CD48P09326 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD48P09326 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD48P09326 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms