Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 MIR3687-1-201ENST00000614492 61 ntBASIC17.46■□□□□ 0.39
SRPRAP08240 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.46■□□□□ 0.39
SRPRAP08240 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SRPRAP08240 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SRPRAP08240 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.46■□□□□ 0.39
SRPRAP08240 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SRPRAP08240 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
SRPRAP08240 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRPRAP08240 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.45■□□□□ 0.38
SRPRAP08240 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRPRAP08240 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRPRAP08240 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRPRAP08240 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRPRAP08240 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRPRAP08240 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SRPRAP08240 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SRPRAP08240 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SRPRAP08240 RPSAP43-201ENST00000402237 625 ntBASIC17.45■□□□□ 0.38
SRPRAP08240 MCCD1P2-201ENST00000423228 335 ntBASIC17.45■□□□□ 0.38
SRPRAP08240 GPX1P2-201ENST00000429271 606 ntBASIC17.45■□□□□ 0.38
SRPRAP08240 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.45■□□□□ 0.38
SRPRAP08240 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.45■□□□□ 0.38
SRPRAP08240 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRPRAP08240 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SRPRAP08240 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.45■□□□□ 0.38
SRPRAP08240 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.45■□□□□ 0.38
SRPRAP08240 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SRPRAP08240 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRPRAP08240 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
SRPRAP08240 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.45■□□□□ 0.38
SRPRAP08240 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
SRPRAP08240 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRPRAP08240 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
SRPRAP08240 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRPRAP08240 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRPRAP08240 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRPRAP08240 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.45■□□□□ 0.38
SRPRAP08240 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.45■□□□□ 0.38
SRPRAP08240 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRPRAP08240 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRPRAP08240 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRPRAP08240 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.45■□□□□ 0.38
SRPRAP08240 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRPRAP08240 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRPRAP08240 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRPRAP08240 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRPRAP08240 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRPRAP08240 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
SRPRAP08240 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRPRAP08240 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.44■□□□□ 0.38
SRPRAP08240 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRPRAP08240 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SRPRAP08240 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.44■□□□□ 0.38
SRPRAP08240 RHOQP3-201ENST00000437982 621 ntBASIC17.44■□□□□ 0.38
SRPRAP08240 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRPRAP08240 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.44■□□□□ 0.38
SRPRAP08240 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRPRAP08240 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.44■□□□□ 0.38
SRPRAP08240 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.44■□□□□ 0.38
SRPRAP08240 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.44■□□□□ 0.38
SRPRAP08240 AC018845.2-201ENST00000568326 409 ntBASIC17.44■□□□□ 0.38
SRPRAP08240 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.44■□□□□ 0.38
SRPRAP08240 AC010327.4-202ENST00000591484 748 ntBASIC17.44■□□□□ 0.38
SRPRAP08240 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.44■□□□□ 0.38
SRPRAP08240 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SRPRAP08240 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SRPRAP08240 AC016396.2-201ENST00000562575 1417 ntBASIC17.44■□□□□ 0.38
SRPRAP08240 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRPRAP08240 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SRPRAP08240 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRPRAP08240 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.44■□□□□ 0.38
SRPRAP08240 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.44■□□□□ 0.38
SRPRAP08240 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.44■□□□□ 0.38
SRPRAP08240 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.44■□□□□ 0.38
SRPRAP08240 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SRPRAP08240 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRPRAP08240 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRPRAP08240 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
SRPRAP08240 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRPRAP08240 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SRPRAP08240 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SRPRAP08240 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRPRAP08240 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRPRAP08240 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRPRAP08240 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRPRAP08240 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRPRAP08240 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.43■□□□□ 0.38
SRPRAP08240 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
SRPRAP08240 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRPRAP08240 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SRPRAP08240 AC010507.1-201ENST00000633895 436 ntBASIC17.43■□□□□ 0.38
SRPRAP08240 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SRPRAP08240 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRPRAP08240 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRPRAP08240 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SRPRAP08240 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRPRAP08240 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.43■□□□□ 0.38
SRPRAP08240 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SRPRAP08240 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRPRAP08240 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms