Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SIX6O95475 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.55□□□□□ -0.08
SIX6O95475 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.55□□□□□ -0.08
SIX6O95475 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SIX6O95475 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SIX6O95475 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.55□□□□□ -0.08
SIX6O95475 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SIX6O95475 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SIX6O95475 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SIX6O95475 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
SIX6O95475 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SIX6O95475 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.54□□□□□ -0.08
SIX6O95475 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SIX6O95475 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
SIX6O95475 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SIX6O95475 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SIX6O95475 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.54□□□□□ -0.08
SIX6O95475 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.54□□□□□ -0.08
SIX6O95475 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.54□□□□□ -0.08
SIX6O95475 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.54□□□□□ -0.08
SIX6O95475 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.54□□□□□ -0.08
SIX6O95475 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC14.54□□□□□ -0.08
SIX6O95475 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC14.54□□□□□ -0.08
SIX6O95475 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.54□□□□□ -0.08
SIX6O95475 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.54□□□□□ -0.08
SIX6O95475 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.54□□□□□ -0.08
SIX6O95475 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.54□□□□□ -0.08
SIX6O95475 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
SIX6O95475 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.54□□□□□ -0.08
SIX6O95475 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.54□□□□□ -0.08
SIX6O95475 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.54□□□□□ -0.08
SIX6O95475 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.54□□□□□ -0.08
SIX6O95475 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIX6O95475 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIX6O95475 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
SIX6O95475 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.53□□□□□ -0.08
SIX6O95475 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIX6O95475 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIX6O95475 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIX6O95475 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.53□□□□□ -0.08
SIX6O95475 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIX6O95475 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.53□□□□□ -0.08
SIX6O95475 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIX6O95475 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.53□□□□□ -0.08
SIX6O95475 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.53□□□□□ -0.08
SIX6O95475 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SIX6O95475 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIX6O95475 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIX6O95475 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SIX6O95475 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SIX6O95475 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SIX6O95475 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
SIX6O95475 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SIX6O95475 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.53□□□□□ -0.08
SIX6O95475 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SIX6O95475 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.53□□□□□ -0.08
SIX6O95475 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIX6O95475 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIX6O95475 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIX6O95475 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIX6O95475 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SIX6O95475 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SIX6O95475 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIX6O95475 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SIX6O95475 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIX6O95475 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
SIX6O95475 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIX6O95475 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIX6O95475 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIX6O95475 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SIX6O95475 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SIX6O95475 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SIX6O95475 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SIX6O95475 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.52□□□□□ -0.08
SIX6O95475 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms