Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX4O95219 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.35■□□□□ 0.21
SNX4O95219 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.35■□□□□ 0.21
SNX4O95219 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX4O95219 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX4O95219 MST1L-201ENST00000442552 2185 ntBASIC16.35■□□□□ 0.21
SNX4O95219 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX4O95219 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SNX4O95219 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SNX4O95219 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.35■□□□□ 0.21
SNX4O95219 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX4O95219 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SNX4O95219 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX4O95219 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SNX4O95219 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX4O95219 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX4O95219 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX4O95219 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX4O95219 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.35■□□□□ 0.21
SNX4O95219 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.34■□□□□ 0.21
SNX4O95219 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNX4O95219 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SNX4O95219 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNX4O95219 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.34■□□□□ 0.21
SNX4O95219 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNX4O95219 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SNX4O95219 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNX4O95219 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNX4O95219 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNX4O95219 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SNX4O95219 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SNX4O95219 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNX4O95219 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.34■□□□□ 0.21
SNX4O95219 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.34■□□□□ 0.21
SNX4O95219 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.34■□□□□ 0.21
SNX4O95219 AC012313.10-201ENST00000623509 926 ntBASIC16.34■□□□□ 0.21
SNX4O95219 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SNX4O95219 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SNX4O95219 AC097374.2-201ENST00000618617 1306 ntBASIC16.34■□□□□ 0.21
SNX4O95219 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.34■□□□□ 0.21
SNX4O95219 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNX4O95219 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNX4O95219 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SNX4O95219 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNX4O95219 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNX4O95219 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.34■□□□□ 0.21
SNX4O95219 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.34■□□□□ 0.21
SNX4O95219 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNX4O95219 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.34■□□□□ 0.21
SNX4O95219 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SNX4O95219 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SNX4O95219 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SNX4O95219 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SNX4O95219 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SNX4O95219 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SNX4O95219 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SNX4O95219 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SNX4O95219 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.33■□□□□ 0.21
SNX4O95219 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SNX4O95219 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SNX4O95219 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNX4O95219 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.33■□□□□ 0.2
SNX4O95219 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
SNX4O95219 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNX4O95219 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNX4O95219 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.33■□□□□ 0.2
SNX4O95219 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SNX4O95219 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SNX4O95219 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNX4O95219 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SNX4O95219 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNX4O95219 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNX4O95219 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNX4O95219 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SNX4O95219 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SNX4O95219 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SNX4O95219 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.33■□□□□ 0.2
SNX4O95219 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.33■□□□□ 0.2
SNX4O95219 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.33■□□□□ 0.2
SNX4O95219 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.33■□□□□ 0.2
SNX4O95219 KRT18P31-201ENST00000506277 1292 ntBASIC16.33■□□□□ 0.2
SNX4O95219 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.33■□□□□ 0.2
SNX4O95219 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.33■□□□□ 0.2
SNX4O95219 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNX4O95219 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.33■□□□□ 0.2
SNX4O95219 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.33■□□□□ 0.2
SNX4O95219 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.33■□□□□ 0.2
SNX4O95219 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.33■□□□□ 0.2
SNX4O95219 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.33■□□□□ 0.2
SNX4O95219 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.33■□□□□ 0.2
SNX4O95219 AC111152.3-201ENST00000569699 673 ntBASIC16.33■□□□□ 0.2
SNX4O95219 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.33■□□□□ 0.2
SNX4O95219 AC005336.2-201ENST00000593183 939 ntBASIC16.33■□□□□ 0.2
SNX4O95219 AC138894.3-201ENST00000603787 634 ntBASIC16.33■□□□□ 0.2
SNX4O95219 AL138831.2-201ENST00000606564 490 ntBASIC16.33■□□□□ 0.2
SNX4O95219 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.33■□□□□ 0.2
SNX4O95219 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.33■□□□□ 0.2
SNX4O95219 AC125634.1-201ENST00000438758 1403 ntBASIC16.33■□□□□ 0.2
SNX4O95219 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNX4O95219 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms