Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCAF4O95104 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.26□□□□□ -0.13
SCAF4O95104 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.26□□□□□ -0.13
SCAF4O95104 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.26□□□□□ -0.13
SCAF4O95104 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCAF4O95104 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SCAF4O95104 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCAF4O95104 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCAF4O95104 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCAF4O95104 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCAF4O95104 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCAF4O95104 KRT18P22-201ENST00000402024 1347 ntBASIC14.26□□□□□ -0.13
SCAF4O95104 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCAF4O95104 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.26□□□□□ -0.13
SCAF4O95104 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
SCAF4O95104 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCAF4O95104 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCAF4O95104 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
SCAF4O95104 SLC25A1P2-201ENST00000430693 912 ntBASIC14.26□□□□□ -0.13
SCAF4O95104 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.26□□□□□ -0.13
SCAF4O95104 EGLN1P1-201ENST00000531623 762 ntBASIC14.26□□□□□ -0.13
SCAF4O95104 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.26□□□□□ -0.13
SCAF4O95104 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.26□□□□□ -0.13
SCAF4O95104 MIR4674-201ENST00000582457 87 ntBASIC14.26□□□□□ -0.13
SCAF4O95104 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
SCAF4O95104 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SCAF4O95104 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.26□□□□□ -0.13
SCAF4O95104 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SCAF4O95104 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCAF4O95104 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.26□□□□□ -0.13
SCAF4O95104 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SCAF4O95104 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCAF4O95104 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SCAF4O95104 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SCAF4O95104 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCAF4O95104 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SCAF4O95104 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
SCAF4O95104 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCAF4O95104 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCAF4O95104 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCAF4O95104 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.25□□□□□ -0.13
SCAF4O95104 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCAF4O95104 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SCAF4O95104 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCAF4O95104 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SCAF4O95104 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.25□□□□□ -0.13
SCAF4O95104 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SCAF4O95104 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCAF4O95104 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCAF4O95104 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.25□□□□□ -0.13
SCAF4O95104 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCAF4O95104 TSPY14P-201ENST00000303979 915 ntBASIC14.25□□□□□ -0.13
SCAF4O95104 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.25□□□□□ -0.13
SCAF4O95104 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.25□□□□□ -0.13
SCAF4O95104 INGX-201ENST00000359239 846 ntBASIC14.25□□□□□ -0.13
SCAF4O95104 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.25□□□□□ -0.13
SCAF4O95104 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.25□□□□□ -0.13
SCAF4O95104 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.25□□□□□ -0.13
SCAF4O95104 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.25□□□□□ -0.13
SCAF4O95104 AC104390.1-201ENST00000555663 520 ntBASIC14.25□□□□□ -0.13
SCAF4O95104 WWOX-216ENST00000569818 525 ntBASIC14.25□□□□□ -0.13
SCAF4O95104 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCAF4O95104 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
SCAF4O95104 AC145285.6-201ENST00000604632 637 ntBASIC14.25□□□□□ -0.13
SCAF4O95104 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC14.25□□□□□ -0.13
SCAF4O95104 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SCAF4O95104 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCAF4O95104 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.25□□□□□ -0.13
SCAF4O95104 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SCAF4O95104 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.25□□□□□ -0.13
SCAF4O95104 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.25□□□□□ -0.13
SCAF4O95104 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SCAF4O95104 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
SCAF4O95104 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCAF4O95104 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCAF4O95104 MIR600HG-201ENST00000449175 5984 ntBASIC14.25□□□□□ -0.13
SCAF4O95104 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SCAF4O95104 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.24□□□□□ -0.13
SCAF4O95104 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCAF4O95104 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
SCAF4O95104 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.24□□□□□ -0.13
SCAF4O95104 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCAF4O95104 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCAF4O95104 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCAF4O95104 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.24□□□□□ -0.13
SCAF4O95104 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.24□□□□□ -0.13
SCAF4O95104 AC092850.2-201ENST00000623821 2697 ntBASIC14.24□□□□□ -0.13
SCAF4O95104 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCAF4O95104 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SCAF4O95104 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.24□□□□□ -0.13
SCAF4O95104 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SCAF4O95104 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCAF4O95104 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.24□□□□□ -0.13
SCAF4O95104 TSPY17P-201ENST00000450329 467 ntBASIC14.24□□□□□ -0.13
SCAF4O95104 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SCAF4O95104 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.24□□□□□ -0.13
SCAF4O95104 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.24□□□□□ -0.13
SCAF4O95104 AL023803.3-201ENST00000615559 522 ntBASIC14.24□□□□□ -0.13
SCAF4O95104 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.24□□□□□ -0.13
SCAF4O95104 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms