Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
BEST1O76090 ZNF259P1-201ENST00000407656 1365 ntBASIC18.15■□□□□ 0.5
BEST1O76090 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST1O76090 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST1O76090 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.15■□□□□ 0.5
BEST1O76090 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.15■□□□□ 0.5
BEST1O76090 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST1O76090 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.14■□□□□ 0.5
BEST1O76090 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
BEST1O76090 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BEST1O76090 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST1O76090 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST1O76090 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST1O76090 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
BEST1O76090 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST1O76090 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST1O76090 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST1O76090 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST1O76090 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BEST1O76090 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST1O76090 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.14■□□□□ 0.49
BEST1O76090 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
BEST1O76090 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST1O76090 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.14■□□□□ 0.49
BEST1O76090 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BEST1O76090 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.14■□□□□ 0.49
BEST1O76090 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.14■□□□□ 0.49
BEST1O76090 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST1O76090 PI4KAP1-204ENST00000612579 1703 ntBASIC18.14■□□□□ 0.49
BEST1O76090 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
BEST1O76090 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.14■□□□□ 0.49
BEST1O76090 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST1O76090 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST1O76090 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BEST1O76090 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
BEST1O76090 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST1O76090 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BEST1O76090 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BEST1O76090 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
BEST1O76090 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
BEST1O76090 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BEST1O76090 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.13■□□□□ 0.49
BEST1O76090 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST1O76090 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST1O76090 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BEST1O76090 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.13■□□□□ 0.49
BEST1O76090 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST1O76090 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.13■□□□□ 0.49
BEST1O76090 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST1O76090 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST1O76090 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BEST1O76090 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST1O76090 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST1O76090 MIR940-201ENST00000401276 94 ntBASIC18.13■□□□□ 0.49
BEST1O76090 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.13■□□□□ 0.49
BEST1O76090 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
BEST1O76090 AC007967.2-201ENST00000432613 625 ntBASIC18.13■□□□□ 0.49
BEST1O76090 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BEST1O76090 POLD2P1-201ENST00000511220 997 ntBASIC18.13■□□□□ 0.49
BEST1O76090 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.13■□□□□ 0.49
BEST1O76090 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.13■□□□□ 0.49
BEST1O76090 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.13■□□□□ 0.49
BEST1O76090 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BEST1O76090 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST1O76090 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BEST1O76090 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
BEST1O76090 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST1O76090 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST1O76090 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST1O76090 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST1O76090 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BEST1O76090 AL645608.8-201ENST00000606034 2086 ntBASIC18.13■□□□□ 0.49
BEST1O76090 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
BEST1O76090 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
BEST1O76090 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.12■□□□□ 0.49
BEST1O76090 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BEST1O76090 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BEST1O76090 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
BEST1O76090 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.12■□□□□ 0.49
BEST1O76090 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.12■□□□□ 0.49
BEST1O76090 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.12■□□□□ 0.49
BEST1O76090 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
BEST1O76090 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.12■□□□□ 0.49
BEST1O76090 PAWRP1-201ENST00000451083 565 ntBASIC18.12■□□□□ 0.49
BEST1O76090 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.12■□□□□ 0.49
BEST1O76090 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BEST1O76090 OR7E47P-204ENST00000575924 449 ntBASIC18.12■□□□□ 0.49
BEST1O76090 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.12■□□□□ 0.49
BEST1O76090 AC140113.2-201ENST00000604370 208 ntBASIC18.12■□□□□ 0.49
BEST1O76090 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.12■□□□□ 0.49
BEST1O76090 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BEST1O76090 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BEST1O76090 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BEST1O76090 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BEST1O76090 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BEST1O76090 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BEST1O76090 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.12■□□□□ 0.49
BEST1O76090 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BEST1O76090 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.12■□□□□ 0.49
BEST1O76090 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms