Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 Z69720.1-201ENST00000601483 472 ntBASIC17.42■□□□□ 0.38
GPC4O75487 AC092119.3-201ENST00000612618 583 ntBASIC17.42■□□□□ 0.38
GPC4O75487 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.42■□□□□ 0.38
GPC4O75487 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
GPC4O75487 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.42■□□□□ 0.38
GPC4O75487 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
GPC4O75487 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.42■□□□□ 0.38
GPC4O75487 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC4O75487 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC4O75487 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC4O75487 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC4O75487 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC4O75487 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GPC4O75487 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
GPC4O75487 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
GPC4O75487 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GPC4O75487 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
GPC4O75487 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GPC4O75487 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.41■□□□□ 0.38
GPC4O75487 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.41■□□□□ 0.38
GPC4O75487 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GPC4O75487 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.41■□□□□ 0.38
GPC4O75487 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.41■□□□□ 0.38
GPC4O75487 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.41■□□□□ 0.38
GPC4O75487 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GPC4O75487 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GPC4O75487 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GPC4O75487 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GPC4O75487 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.41■□□□□ 0.38
GPC4O75487 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GPC4O75487 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GPC4O75487 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GPC4O75487 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.41■□□□□ 0.38
GPC4O75487 KRT17P6-201ENST00000453795 1220 ntBASIC17.41■□□□□ 0.38
GPC4O75487 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
GPC4O75487 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.41■□□□□ 0.38
GPC4O75487 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.41■□□□□ 0.38
GPC4O75487 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
GPC4O75487 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.41■□□□□ 0.38
GPC4O75487 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GPC4O75487 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.41■□□□□ 0.38
GPC4O75487 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GPC4O75487 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
GPC4O75487 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GPC4O75487 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GPC4O75487 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GPC4O75487 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GPC4O75487 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
GPC4O75487 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.41■□□□□ 0.38
GPC4O75487 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
GPC4O75487 REXO1L11P-201ENST00000620964 1927 ntBASIC17.41■□□□□ 0.38
GPC4O75487 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.41■□□□□ 0.38
GPC4O75487 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.41■□□□□ 0.38
GPC4O75487 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GPC4O75487 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.4■□□□□ 0.38
GPC4O75487 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.4■□□□□ 0.38
GPC4O75487 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GPC4O75487 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.4■□□□□ 0.38
GPC4O75487 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.4■□□□□ 0.38
GPC4O75487 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.4■□□□□ 0.38
GPC4O75487 AC022211.2-201ENST00000585075 2527 ntBASIC17.4■□□□□ 0.38
GPC4O75487 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GPC4O75487 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GPC4O75487 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GPC4O75487 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GPC4O75487 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
GPC4O75487 COX5BP2-201ENST00000392354 334 ntBASIC17.4■□□□□ 0.38
GPC4O75487 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.4■□□□□ 0.38
GPC4O75487 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
GPC4O75487 AC007967.3-201ENST00000434308 558 ntBASIC17.4■□□□□ 0.38
GPC4O75487 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.4■□□□□ 0.38
GPC4O75487 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.4■□□□□ 0.38
GPC4O75487 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GPC4O75487 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GPC4O75487 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
GPC4O75487 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.4■□□□□ 0.38
GPC4O75487 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.4■□□□□ 0.38
GPC4O75487 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
GPC4O75487 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.4■□□□□ 0.38
GPC4O75487 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GPC4O75487 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.4■□□□□ 0.38
GPC4O75487 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.4■□□□□ 0.38
GPC4O75487 BX276092.7-203ENST00000637198 1536 ntBASIC17.4■□□□□ 0.38
GPC4O75487 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GPC4O75487 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GPC4O75487 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
GPC4O75487 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
GPC4O75487 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.4■□□□□ 0.38
GPC4O75487 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.4■□□□□ 0.38
GPC4O75487 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
GPC4O75487 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.39■□□□□ 0.38
GPC4O75487 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
GPC4O75487 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
GPC4O75487 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
GPC4O75487 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
GPC4O75487 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GPC4O75487 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GPC4O75487 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GPC4O75487 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
GPC4O75487 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms