Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A1O14983 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A1O14983 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A1O14983 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A1O14983 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.78■□□□□ 0.76
ATP2A1O14983 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
ATP2A1O14983 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A1O14983 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A1O14983 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A1O14983 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.78■□□□□ 0.76
ATP2A1O14983 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ATP2A1O14983 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A1O14983 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A1O14983 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
ATP2A1O14983 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A1O14983 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.78■□□□□ 0.76
ATP2A1O14983 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
ATP2A1O14983 CEND1P1-201ENST00000451006 455 ntBASIC19.78■□□□□ 0.76
ATP2A1O14983 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.78■□□□□ 0.76
ATP2A1O14983 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ATP2A1O14983 AC027796.2-201ENST00000575326 344 ntBASIC19.78■□□□□ 0.76
ATP2A1O14983 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A1O14983 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.78■□□□□ 0.76
ATP2A1O14983 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.78■□□□□ 0.76
ATP2A1O14983 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.78■□□□□ 0.76
ATP2A1O14983 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.78■□□□□ 0.76
ATP2A1O14983 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A1O14983 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A1O14983 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ATP2A1O14983 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A1O14983 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.78■□□□□ 0.76
ATP2A1O14983 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A1O14983 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
ATP2A1O14983 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A1O14983 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A1O14983 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A1O14983 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A1O14983 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ATP2A1O14983 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATP2A1O14983 KRT18P28-201ENST00000453838 1332 ntBASIC19.77■□□□□ 0.76
ATP2A1O14983 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.77■□□□□ 0.76
ATP2A1O14983 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.77■□□□□ 0.76
ATP2A1O14983 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP2A1O14983 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP2A1O14983 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP2A1O14983 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP2A1O14983 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.77■□□□□ 0.76
ATP2A1O14983 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
ATP2A1O14983 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ATP2A1O14983 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
ATP2A1O14983 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATP2A1O14983 SLC25A6P2-201ENST00000497974 877 ntBASIC19.77■□□□□ 0.76
ATP2A1O14983 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.77■□□□□ 0.76
ATP2A1O14983 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
ATP2A1O14983 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.77■□□□□ 0.76
ATP2A1O14983 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.77■□□□□ 0.76
ATP2A1O14983 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.77■□□□□ 0.76
ATP2A1O14983 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP2A1O14983 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATP2A1O14983 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP2A1O14983 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.77■□□□□ 0.76
ATP2A1O14983 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP2A1O14983 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ATP2A1O14983 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ATP2A1O14983 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
ATP2A1O14983 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ATP2A1O14983 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ATP2A1O14983 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
ATP2A1O14983 AC129492.6-201ENST00000611383 1305 ntBASIC19.76■□□□□ 0.75
ATP2A1O14983 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATP2A1O14983 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.76■□□□□ 0.75
ATP2A1O14983 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATP2A1O14983 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATP2A1O14983 NEFHP1-201ENST00000412845 2629 ntBASIC19.76■□□□□ 0.75
ATP2A1O14983 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.76■□□□□ 0.75
ATP2A1O14983 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP2A1O14983 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP2A1O14983 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP2A1O14983 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATP2A1O14983 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP2A1O14983 AL354751.1-201ENST00000412768 1863 ntBASIC19.76■□□□□ 0.75
ATP2A1O14983 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP2A1O14983 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP2A1O14983 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
ATP2A1O14983 CNN2P11-201ENST00000429351 262 ntBASIC19.76■□□□□ 0.75
ATP2A1O14983 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.76■□□□□ 0.75
ATP2A1O14983 AC087163.2-201ENST00000457299 853 ntBASIC19.76■□□□□ 0.75
ATP2A1O14983 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATP2A1O14983 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.76■□□□□ 0.75
ATP2A1O14983 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.76■□□□□ 0.75
ATP2A1O14983 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.76■□□□□ 0.75
ATP2A1O14983 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP2A1O14983 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATP2A1O14983 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.76■□□□□ 0.75
ATP2A1O14983 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP2A1O14983 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP2A1O14983 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATP2A1O14983 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP2A1O14983 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.75■□□□□ 0.75
ATP2A1O14983 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms