Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
UBFD1O14562 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBFD1O14562 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBFD1O14562 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBFD1O14562 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBFD1O14562 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.82■□□□□ 0.28
UBFD1O14562 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.82■□□□□ 0.28
UBFD1O14562 KRT8P26-201ENST00000534154 1276 ntBASIC16.82■□□□□ 0.28
UBFD1O14562 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBFD1O14562 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.82■□□□□ 0.28
UBFD1O14562 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.82■□□□□ 0.28
UBFD1O14562 AP005901.3-202ENST00000581653 237 ntBASIC16.82■□□□□ 0.28
UBFD1O14562 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
UBFD1O14562 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBFD1O14562 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBFD1O14562 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
UBFD1O14562 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.82■□□□□ 0.28
UBFD1O14562 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.82■□□□□ 0.28
UBFD1O14562 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBFD1O14562 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBFD1O14562 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBFD1O14562 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBFD1O14562 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
UBFD1O14562 AC009336.1-201ENST00000608941 1553 ntBASIC16.81■□□□□ 0.28
UBFD1O14562 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
UBFD1O14562 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBFD1O14562 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBFD1O14562 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBFD1O14562 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBFD1O14562 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBFD1O14562 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBFD1O14562 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBFD1O14562 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.81■□□□□ 0.28
UBFD1O14562 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBFD1O14562 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBFD1O14562 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBFD1O14562 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.81■□□□□ 0.28
UBFD1O14562 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBFD1O14562 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.81■□□□□ 0.28
UBFD1O14562 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.81■□□□□ 0.28
UBFD1O14562 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.81■□□□□ 0.28
UBFD1O14562 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBFD1O14562 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBFD1O14562 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.81■□□□□ 0.28
UBFD1O14562 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
UBFD1O14562 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.81■□□□□ 0.28
UBFD1O14562 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBFD1O14562 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
UBFD1O14562 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBFD1O14562 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
UBFD1O14562 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.81■□□□□ 0.28
UBFD1O14562 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBFD1O14562 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
UBFD1O14562 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
UBFD1O14562 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
UBFD1O14562 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBFD1O14562 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBFD1O14562 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBFD1O14562 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.8■□□□□ 0.28
UBFD1O14562 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBFD1O14562 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.8■□□□□ 0.28
UBFD1O14562 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBFD1O14562 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBFD1O14562 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
UBFD1O14562 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBFD1O14562 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.8■□□□□ 0.28
UBFD1O14562 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.8■□□□□ 0.28
UBFD1O14562 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBFD1O14562 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBFD1O14562 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.8■□□□□ 0.28
UBFD1O14562 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.8■□□□□ 0.28
UBFD1O14562 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBFD1O14562 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.8■□□□□ 0.28
UBFD1O14562 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBFD1O14562 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
UBFD1O14562 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.8■□□□□ 0.28
UBFD1O14562 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
UBFD1O14562 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBFD1O14562 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBFD1O14562 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
UBFD1O14562 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.8■□□□□ 0.28
UBFD1O14562 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.8■□□□□ 0.28
UBFD1O14562 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
UBFD1O14562 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
UBFD1O14562 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBFD1O14562 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.8■□□□□ 0.28
UBFD1O14562 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBFD1O14562 FRMD8P1-201ENST00000440433 1524 ntBASIC16.8■□□□□ 0.28
UBFD1O14562 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
UBFD1O14562 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.8■□□□□ 0.28
UBFD1O14562 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBFD1O14562 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.79■□□□□ 0.28
UBFD1O14562 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.79■□□□□ 0.28
UBFD1O14562 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.79■□□□□ 0.28
UBFD1O14562 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBFD1O14562 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBFD1O14562 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.79■□□□□ 0.28
UBFD1O14562 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
UBFD1O14562 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBFD1O14562 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms