Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 AC092474.2-201ENST00000424288 719 ntBASIC16.27■□□□□ 0.2
NTN3O00634 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.27■□□□□ 0.2
NTN3O00634 KRT8P23-201ENST00000560090 1207 ntBASIC16.27■□□□□ 0.2
NTN3O00634 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.27■□□□□ 0.2
NTN3O00634 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.27■□□□□ 0.2
NTN3O00634 MIR4745-201ENST00000577608 62 ntBASIC16.27■□□□□ 0.2
NTN3O00634 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NTN3O00634 AJ011932.1-201ENST00000621707 465 ntBASIC16.27■□□□□ 0.2
NTN3O00634 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NTN3O00634 AC084121.4-201ENST00000641598 221 ntBASIC16.27■□□□□ 0.2
NTN3O00634 AF228730.8-201ENST00000642140 221 ntBASIC16.27■□□□□ 0.2
NTN3O00634 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NTN3O00634 AL353732.1-201ENST00000569618 1459 ntBASIC16.27■□□□□ 0.19
NTN3O00634 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NTN3O00634 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NTN3O00634 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NTN3O00634 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NTN3O00634 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.26■□□□□ 0.19
NTN3O00634 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
NTN3O00634 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
NTN3O00634 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NTN3O00634 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NTN3O00634 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NTN3O00634 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NTN3O00634 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.26■□□□□ 0.19
NTN3O00634 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NTN3O00634 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NTN3O00634 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.26■□□□□ 0.19
NTN3O00634 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.26■□□□□ 0.19
NTN3O00634 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.26■□□□□ 0.19
NTN3O00634 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.26■□□□□ 0.19
NTN3O00634 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.26■□□□□ 0.19
NTN3O00634 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.26■□□□□ 0.19
NTN3O00634 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.26■□□□□ 0.19
NTN3O00634 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NTN3O00634 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.26■□□□□ 0.19
NTN3O00634 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.26■□□□□ 0.19
NTN3O00634 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NTN3O00634 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NTN3O00634 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NTN3O00634 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NTN3O00634 AC133963.1-201ENST00000504166 1679 ntBASIC16.26■□□□□ 0.19
NTN3O00634 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NTN3O00634 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.26■□□□□ 0.19
NTN3O00634 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.26■□□□□ 0.19
NTN3O00634 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NTN3O00634 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.26■□□□□ 0.19
NTN3O00634 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NTN3O00634 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
NTN3O00634 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NTN3O00634 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NTN3O00634 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NTN3O00634 TUBB3P1-201ENST00000405796 1332 ntBASIC16.25■□□□□ 0.19
NTN3O00634 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.25■□□□□ 0.19
NTN3O00634 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NTN3O00634 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.25■□□□□ 0.19
NTN3O00634 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.25■□□□□ 0.19
NTN3O00634 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.25■□□□□ 0.19
NTN3O00634 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NTN3O00634 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
NTN3O00634 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NTN3O00634 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NTN3O00634 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.25■□□□□ 0.19
NTN3O00634 HCG4-201ENST00000418983 998 ntBASIC16.25■□□□□ 0.19
NTN3O00634 AC055876.3-201ENST00000431496 288 ntBASIC16.25■□□□□ 0.19
NTN3O00634 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.25■□□□□ 0.19
NTN3O00634 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.25■□□□□ 0.19
NTN3O00634 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NTN3O00634 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NTN3O00634 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.25■□□□□ 0.19
NTN3O00634 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NTN3O00634 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.25■□□□□ 0.19
NTN3O00634 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NTN3O00634 AC138649.4-201ENST00000612222 287 ntBASIC16.25■□□□□ 0.19
NTN3O00634 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NTN3O00634 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
NTN3O00634 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
NTN3O00634 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NTN3O00634 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NTN3O00634 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
NTN3O00634 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
NTN3O00634 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NTN3O00634 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.25■□□□□ 0.19
NTN3O00634 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.25■□□□□ 0.19
NTN3O00634 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NTN3O00634 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NTN3O00634 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NTN3O00634 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
NTN3O00634 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.24■□□□□ 0.19
NTN3O00634 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NTN3O00634 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NTN3O00634 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NTN3O00634 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NTN3O00634 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NTN3O00634 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NTN3O00634 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NTN3O00634 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
NTN3O00634 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NTN3O00634 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NTN3O00634 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms