Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.49■□□□□ 0.71
DDX39AO00148 TERC-201ENST00000602385 541 ntBASIC19.49■□□□□ 0.71
DDX39AO00148 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
DDX39AO00148 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX39AO00148 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DDX39AO00148 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX39AO00148 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX39AO00148 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX39AO00148 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.49■□□□□ 0.71
DDX39AO00148 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX39AO00148 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.49■□□□□ 0.71
DDX39AO00148 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.49■□□□□ 0.71
DDX39AO00148 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
DDX39AO00148 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDX39AO00148 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.48■□□□□ 0.71
DDX39AO00148 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.48■□□□□ 0.71
DDX39AO00148 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.48■□□□□ 0.71
DDX39AO00148 MED15P5-201ENST00000423150 992 ntBASIC19.48■□□□□ 0.71
DDX39AO00148 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.48■□□□□ 0.71
DDX39AO00148 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
DDX39AO00148 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX39AO00148 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
DDX39AO00148 PGM5P2-202ENST00000637225 1043 ntBASIC19.48■□□□□ 0.71
DDX39AO00148 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
DDX39AO00148 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDX39AO00148 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX39AO00148 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.48■□□□□ 0.71
DDX39AO00148 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.48■□□□□ 0.71
DDX39AO00148 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
DDX39AO00148 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX39AO00148 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX39AO00148 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX39AO00148 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.48■□□□□ 0.71
DDX39AO00148 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX39AO00148 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX39AO00148 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX39AO00148 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX39AO00148 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
DDX39AO00148 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX39AO00148 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDX39AO00148 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.47■□□□□ 0.71
DDX39AO00148 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.47■□□□□ 0.71
DDX39AO00148 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX39AO00148 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX39AO00148 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
DDX39AO00148 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
DDX39AO00148 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX39AO00148 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX39AO00148 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDX39AO00148 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX39AO00148 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX39AO00148 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX39AO00148 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX39AO00148 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX39AO00148 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.46■□□□□ 0.71
DDX39AO00148 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX39AO00148 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX39AO00148 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX39AO00148 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX39AO00148 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
DDX39AO00148 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX39AO00148 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX39AO00148 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX39AO00148 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX39AO00148 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX39AO00148 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX39AO00148 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.46■□□□□ 0.71
DDX39AO00148 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX39AO00148 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.46■□□□□ 0.71
DDX39AO00148 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.46■□□□□ 0.71
DDX39AO00148 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.46■□□□□ 0.71
DDX39AO00148 ACTG1P4-201ENST00000425123 1122 ntBASIC19.46■□□□□ 0.71
DDX39AO00148 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX39AO00148 AC108073.2-201ENST00000464002 357 ntBASIC19.46■□□□□ 0.71
DDX39AO00148 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.46■□□□□ 0.71
DDX39AO00148 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX39AO00148 MIR4751-201ENST00000578027 74 ntBASIC19.46■□□□□ 0.71
DDX39AO00148 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
DDX39AO00148 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
DDX39AO00148 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.46■□□□□ 0.71
DDX39AO00148 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX39AO00148 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX39AO00148 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX39AO00148 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX39AO00148 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX39AO00148 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX39AO00148 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX39AO00148 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX39AO00148 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
DDX39AO00148 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
DDX39AO00148 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX39AO00148 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX39AO00148 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX39AO00148 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX39AO00148 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX39AO00148 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX39AO00148 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
DDX39AO00148 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.45■□□□□ 0.7
DDX39AO00148 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.45■□□□□ 0.7
DDX39AO00148 AC027601.4-201ENST00000611259 610 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms