Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 IGLL3P-201ENST00000412472 434 ntBASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 AC004877.2-201ENST00000623941 599 ntBASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 AC012317.2-201ENST00000623305 2251 ntBASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 BCAR1-209ENST00000546196 1340 ntBASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 AC096734.2-201ENST00000562054 433 ntBASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.23■□□□□ 0.35
TBC1D3FA6NER0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 OR7E47P-204ENST00000575924 449 ntBASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 C20orf181-201ENST00000623918 480 ntBASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 AC010507.1-201ENST00000633895 436 ntBASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 AC007064.4-201ENST00000637740 555 ntBASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms