Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC21.7■■□□□ 1.06
RTCBQ9Y3I0 AC005412.3-201ENST00000580309 715 ntBASIC21.7■■□□□ 1.06
RTCBQ9Y3I0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTCBQ9Y3I0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.7■■□□□ 1.06
RTCBQ9Y3I0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 AP005018.1-201ENST00000525475 301 ntBASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC21.69■■□□□ 1.06
RTCBQ9Y3I0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RTCBQ9Y3I0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
RTCBQ9Y3I0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTCBQ9Y3I0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTCBQ9Y3I0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTCBQ9Y3I0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTCBQ9Y3I0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC21.68■■□□□ 1.06
RTCBQ9Y3I0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC21.68■■□□□ 1.06
RTCBQ9Y3I0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC21.68■■□□□ 1.06
RTCBQ9Y3I0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC21.68■■□□□ 1.06
RTCBQ9Y3I0 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC21.68■■□□□ 1.06
RTCBQ9Y3I0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC21.68■■□□□ 1.06
RTCBQ9Y3I0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC21.68■■□□□ 1.06
RTCBQ9Y3I0 MIR6080-201ENST00000617359 66 ntBASIC21.68■■□□□ 1.06
RTCBQ9Y3I0 AC012569.1-201ENST00000591191 1524 ntBASIC21.68■■□□□ 1.06
RTCBQ9Y3I0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTCBQ9Y3I0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RTCBQ9Y3I0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.68■■□□□ 1.06
RTCBQ9Y3I0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTCBQ9Y3I0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTCBQ9Y3I0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 HNRNPRP1-201ENST00000453465 1695 ntBASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 PPP6R2P1-201ENST00000450880 1275 ntBASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RTCBQ9Y3I0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.66■■□□□ 1.06
RTCBQ9Y3I0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTCBQ9Y3I0 FLJ13224-201ENST00000313737 1514 ntBASIC21.66■■□□□ 1.06
RTCBQ9Y3I0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.66■■□□□ 1.06
RTCBQ9Y3I0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTCBQ9Y3I0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTCBQ9Y3I0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.66■■□□□ 1.06
RTCBQ9Y3I0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.66■■□□□ 1.06
RTCBQ9Y3I0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RTCBQ9Y3I0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.66■■□□□ 1.06
RTCBQ9Y3I0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RTCBQ9Y3I0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC21.66■■□□□ 1.06
RTCBQ9Y3I0 CRB3P1-201ENST00000449338 276 ntBASIC21.66■■□□□ 1.06
RTCBQ9Y3I0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC21.66■■□□□ 1.06
RTCBQ9Y3I0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC21.66■■□□□ 1.06
RTCBQ9Y3I0 AC109635.5-201ENST00000533593 962 ntBASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms