Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 AC002056.1-201ENST00000395613 760 ntBASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 HCG4-201ENST00000418983 998 ntBASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 CEND1P1-201ENST00000451006 455 ntBASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 DUX4L17-201ENST00000557360 1267 ntBASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 AL121761.2-201ENST00000598007 1648 ntBASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SYNPO2Q9UMS6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
SYNPO2Q9UMS6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.81■□□□□ 0.76
SYNPO2Q9UMS6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.81■□□□□ 0.76
SYNPO2Q9UMS6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SYNPO2Q9UMS6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNPO2Q9UMS6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.81■□□□□ 0.76
SYNPO2Q9UMS6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNPO2Q9UMS6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNPO2Q9UMS6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNPO2Q9UMS6 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNPO2Q9UMS6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.81■□□□□ 0.76
SYNPO2Q9UMS6 AP000344.2-201ENST00000512987 629 ntBASIC19.81■□□□□ 0.76
SYNPO2Q9UMS6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.81■□□□□ 0.76
SYNPO2Q9UMS6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.81■□□□□ 0.76
SYNPO2Q9UMS6 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.81■□□□□ 0.76
SYNPO2Q9UMS6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNPO2Q9UMS6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SYNPO2Q9UMS6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SYNPO2Q9UMS6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SYNPO2Q9UMS6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNPO2Q9UMS6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.81■□□□□ 0.76
SYNPO2Q9UMS6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 ADH5P3-201ENST00000433842 1137 ntBASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNPO2Q9UMS6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 AL513210.1-201ENST00000629608 234 ntBASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms