Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NLKQ9UBE8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.47■□□□□ 0.07
NLKQ9UBE8 AC140113.3-201ENST00000605663 199 ntBASIC15.47■□□□□ 0.07
NLKQ9UBE8 AL031432.5-201ENST00000641059 760 ntBASIC15.47■□□□□ 0.07
NLKQ9UBE8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
NLKQ9UBE8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.47■□□□□ 0.07
NLKQ9UBE8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NLKQ9UBE8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NLKQ9UBE8 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NLKQ9UBE8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NLKQ9UBE8 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NLKQ9UBE8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NLKQ9UBE8 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NLKQ9UBE8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
NLKQ9UBE8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
NLKQ9UBE8 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NLKQ9UBE8 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
NLKQ9UBE8 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
NLKQ9UBE8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.46■□□□□ 0.07
NLKQ9UBE8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NLKQ9UBE8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NLKQ9UBE8 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NLKQ9UBE8 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NLKQ9UBE8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.46■□□□□ 0.07
NLKQ9UBE8 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.46■□□□□ 0.07
NLKQ9UBE8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.46■□□□□ 0.07
NLKQ9UBE8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.46■□□□□ 0.07
NLKQ9UBE8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NLKQ9UBE8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NLKQ9UBE8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
NLKQ9UBE8 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.46■□□□□ 0.07
NLKQ9UBE8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
NLKQ9UBE8 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.46■□□□□ 0.07
NLKQ9UBE8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.46■□□□□ 0.07
NLKQ9UBE8 BX664615.1-201ENST00000443558 458 ntBASIC15.46■□□□□ 0.07
NLKQ9UBE8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
NLKQ9UBE8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.46■□□□□ 0.07
NLKQ9UBE8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.46■□□□□ 0.07
NLKQ9UBE8 AL023973.1-201ENST00000624619 620 ntBASIC15.46■□□□□ 0.07
NLKQ9UBE8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NLKQ9UBE8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
NLKQ9UBE8 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.46■□□□□ 0.07
NLKQ9UBE8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NLKQ9UBE8 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
NLKQ9UBE8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NLKQ9UBE8 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.46■□□□□ 0.07
NLKQ9UBE8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NLKQ9UBE8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NLKQ9UBE8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NLKQ9UBE8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.46■□□□□ 0.06
NLKQ9UBE8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NLKQ9UBE8 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
NLKQ9UBE8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
NLKQ9UBE8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
NLKQ9UBE8 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NLKQ9UBE8 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.45■□□□□ 0.06
NLKQ9UBE8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
NLKQ9UBE8 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
NLKQ9UBE8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NLKQ9UBE8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NLKQ9UBE8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NLKQ9UBE8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NLKQ9UBE8 AC073508.3-201ENST00000619697 1419 ntBASIC15.45■□□□□ 0.06
NLKQ9UBE8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
NLKQ9UBE8 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NLKQ9UBE8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NLKQ9UBE8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NLKQ9UBE8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NLKQ9UBE8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NLKQ9UBE8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.45■□□□□ 0.06
NLKQ9UBE8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.45■□□□□ 0.06
NLKQ9UBE8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
NLKQ9UBE8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NLKQ9UBE8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NLKQ9UBE8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.45■□□□□ 0.06
NLKQ9UBE8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.45■□□□□ 0.06
NLKQ9UBE8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.45■□□□□ 0.06
NLKQ9UBE8 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.45■□□□□ 0.06
NLKQ9UBE8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.45■□□□□ 0.06
NLKQ9UBE8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.45■□□□□ 0.06
NLKQ9UBE8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.45■□□□□ 0.06
NLKQ9UBE8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NLKQ9UBE8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NLKQ9UBE8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NLKQ9UBE8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NLKQ9UBE8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
NLKQ9UBE8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
NLKQ9UBE8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.45■□□□□ 0.06
NLKQ9UBE8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NLKQ9UBE8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NLKQ9UBE8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.45■□□□□ 0.06
NLKQ9UBE8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NLKQ9UBE8 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NLKQ9UBE8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NLKQ9UBE8 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.45■□□□□ 0.06
NLKQ9UBE8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
NLKQ9UBE8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.44■□□□□ 0.06
NLKQ9UBE8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NLKQ9UBE8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
NLKQ9UBE8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms