Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SALL1Q9NSC2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.82■□□□□ 0.92
SALL1Q9NSC2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.82■□□□□ 0.92
SALL1Q9NSC2 MKNK2P1-201ENST00000437526 628 ntBASIC20.82■□□□□ 0.92
SALL1Q9NSC2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.82■□□□□ 0.92
SALL1Q9NSC2 KRT19P2-202ENST00000557173 1012 ntBASIC20.82■□□□□ 0.92
SALL1Q9NSC2 AC005829.1-201ENST00000570002 483 ntBASIC20.82■□□□□ 0.92
SALL1Q9NSC2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SALL1Q9NSC2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SALL1Q9NSC2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SALL1Q9NSC2 AL645608.8-201ENST00000606034 2086 ntBASIC20.82■□□□□ 0.92
SALL1Q9NSC2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SALL1Q9NSC2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SALL1Q9NSC2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SALL1Q9NSC2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.82■□□□□ 0.92
SALL1Q9NSC2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SALL1Q9NSC2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SALL1Q9NSC2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SALL1Q9NSC2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SALL1Q9NSC2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.81■□□□□ 0.92
SALL1Q9NSC2 CXCL1P1-201ENST00000502804 216 ntBASIC20.81■□□□□ 0.92
SALL1Q9NSC2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.81■□□□□ 0.92
SALL1Q9NSC2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.81■□□□□ 0.92
SALL1Q9NSC2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SALL1Q9NSC2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.81■□□□□ 0.92
SALL1Q9NSC2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SALL1Q9NSC2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SALL1Q9NSC2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SALL1Q9NSC2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SALL1Q9NSC2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SALL1Q9NSC2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SALL1Q9NSC2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SALL1Q9NSC2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.81■□□□□ 0.92
SALL1Q9NSC2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SALL1Q9NSC2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SALL1Q9NSC2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 SLC25A6P2-201ENST00000497974 877 ntBASIC20.8■□□□□ 0.92
SALL1Q9NSC2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 BCAR1-209ENST00000546196 1340 ntBASIC20.8■□□□□ 0.92
SALL1Q9NSC2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SALL1Q9NSC2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SALL1Q9NSC2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SALL1Q9NSC2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SALL1Q9NSC2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SALL1Q9NSC2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SALL1Q9NSC2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SALL1Q9NSC2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.79■□□□□ 0.92
SALL1Q9NSC2 FAM185BP-201ENST00000443595 716 ntBASIC20.79■□□□□ 0.92
SALL1Q9NSC2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.79■□□□□ 0.92
SALL1Q9NSC2 AC087163.2-201ENST00000457299 853 ntBASIC20.79■□□□□ 0.92
SALL1Q9NSC2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.79■□□□□ 0.92
SALL1Q9NSC2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.79■□□□□ 0.92
SALL1Q9NSC2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.79■□□□□ 0.92
SALL1Q9NSC2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SALL1Q9NSC2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SALL1Q9NSC2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SALL1Q9NSC2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SALL1Q9NSC2 AC139713.2-201ENST00000641328 2723 ntBASIC20.79■□□□□ 0.92
SALL1Q9NSC2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
SALL1Q9NSC2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SALL1Q9NSC2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SALL1Q9NSC2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.79■□□□□ 0.92
SALL1Q9NSC2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.79■□□□□ 0.92
SALL1Q9NSC2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 AC211486.1-202ENST00000416371 468 ntBASIC20.78■□□□□ 0.92
SALL1Q9NSC2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 AC211476.1-201ENST00000503899 468 ntBASIC20.78■□□□□ 0.92
SALL1Q9NSC2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 AC079781.4-201ENST00000641908 219 ntBASIC20.78■□□□□ 0.92
SALL1Q9NSC2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms