Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TLR9Q9NR96 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TLR9Q9NR96 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TLR9Q9NR96 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TLR9Q9NR96 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TLR9Q9NR96 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TLR9Q9NR96 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TLR9Q9NR96 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TLR9Q9NR96 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TLR9Q9NR96 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TLR9Q9NR96 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TLR9Q9NR96 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TLR9Q9NR96 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TLR9Q9NR96 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
TLR9Q9NR96 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TLR9Q9NR96 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TLR9Q9NR96 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TLR9Q9NR96 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TLR9Q9NR96 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TLR9Q9NR96 AL355306.1-201ENST00000415580 579 ntBASIC18.31■□□□□ 0.52
TLR9Q9NR96 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.31■□□□□ 0.52
TLR9Q9NR96 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.31■□□□□ 0.52
TLR9Q9NR96 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TLR9Q9NR96 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.31■□□□□ 0.52
TLR9Q9NR96 FAM86C2P-203ENST00000528684 1004 ntBASIC18.31■□□□□ 0.52
TLR9Q9NR96 MIR4745-201ENST00000577608 62 ntBASIC18.31■□□□□ 0.52
TLR9Q9NR96 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.31■□□□□ 0.52
TLR9Q9NR96 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TLR9Q9NR96 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TLR9Q9NR96 AP000997.3-201ENST00000623333 2250 ntBASIC18.31■□□□□ 0.52
TLR9Q9NR96 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TLR9Q9NR96 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TLR9Q9NR96 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TLR9Q9NR96 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TLR9Q9NR96 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.31■□□□□ 0.52
TLR9Q9NR96 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TLR9Q9NR96 AL135999.2-201ENST00000622438 1686 ntBASIC18.31■□□□□ 0.52
TLR9Q9NR96 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TLR9Q9NR96 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TLR9Q9NR96 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TLR9Q9NR96 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TLR9Q9NR96 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TLR9Q9NR96 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.31■□□□□ 0.52
TLR9Q9NR96 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.3■□□□□ 0.52
TLR9Q9NR96 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TLR9Q9NR96 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TLR9Q9NR96 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TLR9Q9NR96 AC046185.3-201ENST00000623228 1824 ntBASIC18.3■□□□□ 0.52
TLR9Q9NR96 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.3■□□□□ 0.52
TLR9Q9NR96 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TLR9Q9NR96 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TLR9Q9NR96 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.3■□□□□ 0.52
TLR9Q9NR96 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.3■□□□□ 0.52
TLR9Q9NR96 AC009113.1-201ENST00000570267 2443 ntBASIC18.3■□□□□ 0.52
TLR9Q9NR96 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TLR9Q9NR96 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
TLR9Q9NR96 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.3■□□□□ 0.52
TLR9Q9NR96 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.3■□□□□ 0.52
TLR9Q9NR96 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TLR9Q9NR96 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TLR9Q9NR96 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TLR9Q9NR96 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.3■□□□□ 0.52
TLR9Q9NR96 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TLR9Q9NR96 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.3■□□□□ 0.52
TLR9Q9NR96 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.3■□□□□ 0.52
TLR9Q9NR96 SLC25A6P2-201ENST00000497974 877 ntBASIC18.3■□□□□ 0.52
TLR9Q9NR96 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.3■□□□□ 0.52
TLR9Q9NR96 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.3■□□□□ 0.52
TLR9Q9NR96 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TLR9Q9NR96 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TLR9Q9NR96 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TLR9Q9NR96 AC093520.2-201ENST00000561830 333 ntBASIC18.3■□□□□ 0.52
TLR9Q9NR96 AC138761.1-201ENST00000584393 385 ntBASIC18.3■□□□□ 0.52
TLR9Q9NR96 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.3■□□□□ 0.52
TLR9Q9NR96 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
TLR9Q9NR96 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TLR9Q9NR96 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.3■□□□□ 0.52
TLR9Q9NR96 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TLR9Q9NR96 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TLR9Q9NR96 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.3■□□□□ 0.52
TLR9Q9NR96 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TLR9Q9NR96 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TLR9Q9NR96 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
TLR9Q9NR96 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TLR9Q9NR96 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TLR9Q9NR96 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.29■□□□□ 0.52
TLR9Q9NR96 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.29■□□□□ 0.52
TLR9Q9NR96 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
TLR9Q9NR96 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TLR9Q9NR96 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TLR9Q9NR96 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TLR9Q9NR96 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.29■□□□□ 0.52
TLR9Q9NR96 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.29■□□□□ 0.52
TLR9Q9NR96 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TLR9Q9NR96 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TLR9Q9NR96 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TLR9Q9NR96 AL671277.1-201ENST00000429656 993 ntBASIC18.29■□□□□ 0.52
TLR9Q9NR96 SPDYE11-202ENST00000450699 704 ntBASIC18.29■□□□□ 0.52
TLR9Q9NR96 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TLR9Q9NR96 AC087163.2-201ENST00000457299 853 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms