Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTN4Q9NQC3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTN4Q9NQC3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 AC092171.3-201ENST00000610122 2651 ntBASIC20.55■□□□□ 0.88
RTN4Q9NQC3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 AP003097.1-201ENST00000530657 1135 ntBASIC20.55■□□□□ 0.88
RTN4Q9NQC3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 TNFAIP3-211ENST00000621150 1613 ntTSL 5 BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTN4Q9NQC3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 KRT8P3-201ENST00000519669 1449 ntBASIC20.54■□□□□ 0.88
RTN4Q9NQC3 FLJ13224-201ENST00000313737 1514 ntBASIC20.54■□□□□ 0.88
RTN4Q9NQC3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 UGT1A10-202ENST00000373445 2065 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 KRT17P3-201ENST00000420566 1262 ntBASIC20.54■□□□□ 0.88
RTN4Q9NQC3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 KRT16P5-201ENST00000455284 522 ntBASIC20.54■□□□□ 0.88
RTN4Q9NQC3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC20.54■□□□□ 0.88
RTN4Q9NQC3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 AL445675.2-201ENST00000620291 557 ntBASIC20.53■□□□□ 0.88
RTN4Q9NQC3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms