Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
NLRC4Q9NPP4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NLRC4Q9NPP4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NLRC4Q9NPP4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.83■□□□□ 0.6
NLRC4Q9NPP4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.83■□□□□ 0.6
NLRC4Q9NPP4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NLRC4Q9NPP4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.83■□□□□ 0.6
NLRC4Q9NPP4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NLRC4Q9NPP4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.83■□□□□ 0.6
NLRC4Q9NPP4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
NLRC4Q9NPP4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.83■□□□□ 0.6
NLRC4Q9NPP4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.83■□□□□ 0.6
NLRC4Q9NPP4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
NLRC4Q9NPP4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NLRC4Q9NPP4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.83■□□□□ 0.6
NLRC4Q9NPP4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.83■□□□□ 0.6
NLRC4Q9NPP4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
NLRC4Q9NPP4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.83■□□□□ 0.6
NLRC4Q9NPP4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.83■□□□□ 0.6
NLRC4Q9NPP4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NLRC4Q9NPP4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NLRC4Q9NPP4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NLRC4Q9NPP4 KRT8P10-201ENST00000450021 1447 ntBASIC18.83■□□□□ 0.6
NLRC4Q9NPP4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 AC005332.1-201ENST00000577698 1310 ntBASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 AC122714.2-201ENST00000502787 707 ntBASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.82■□□□□ 0.6
NLRC4Q9NPP4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 FAM220CP-201ENST00000395253 831 ntBASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 NTF6B-201ENST00000591913 560 ntBASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.81■□□□□ 0.6
NLRC4Q9NPP4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms