Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 IGHV3-52-201ENST00000519770 353 ntBASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 Z83836.1-201ENST00000624605 1642 ntBASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 AC105020.1-201ENST00000435356 2205 ntBASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 AC122714.2-201ENST00000502787 707 ntBASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 VENTXP5-201ENST00000523979 775 ntBASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
POLR2J3Q9H1A7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 AC018695.7-201ENST00000624587 2492 ntBASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 LINC01238-205ENST00000567549 1107 ntBASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 AL353801.3-201ENST00000609898 542 ntBASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 AC006011.2-201ENST00000621313 1158 ntBASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
POLR2J3Q9H1A7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms