Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 WRB-204ENST00000398753 699 ntTSL 3 BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 AC190387.1-201ENST00000551683 408 ntBASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 KRT8P23-201ENST00000560090 1207 ntBASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 LINC01225-203ENST00000563550 1244 ntBASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 AC012569.1-201ENST00000591191 1524 ntBASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 SPDYE14P-201ENST00000442619 822 ntBASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 AC084121.4-201ENST00000641598 221 ntBASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 AF228730.8-201ENST00000642140 221 ntBASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDH11XQ9BZA7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 IGHV3-62-201ENST00000520057 340 ntBASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDH11XQ9BZA7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 BAD-202ENST00000394531 631 ntTSL 3 BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 BAD-207ENST00000544785 525 ntTSL 3 BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 AC026150.2-201ENST00000564693 1156 ntBASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 AC140878.1-201ENST00000565277 250 ntBASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
PCDH11XQ9BZA7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms