Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 FLJ38576-201ENST00000623820 2459 ntBASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 AC122714.2-201ENST00000502787 707 ntBASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 GUSBP12-201ENST00000513727 720 ntBASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 AC111152.3-201ENST00000569699 673 ntBASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 AC012306.2-201ENST00000609350 630 ntBASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 AC097493.4-201ENST00000641197 219 ntBASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.37□□□□□ -0.27
SHANK2-AS3Q9BTD1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 AC092647.4-201ENST00000457211 535 ntBASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.36□□□□□ -0.27
SHANK2-AS3Q9BTD1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms