Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HDHD3Q9BSH5 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HDHD3Q9BSH5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HDHD3Q9BSH5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HDHD3Q9BSH5 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HDHD3Q9BSH5 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HDHD3Q9BSH5 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
HDHD3Q9BSH5 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HDHD3Q9BSH5 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.68□□□□□ -0.06
HDHD3Q9BSH5 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HDHD3Q9BSH5 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
HDHD3Q9BSH5 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HDHD3Q9BSH5 AC092068.3-201ENST00000587894 2016 ntBASIC14.68□□□□□ -0.06
HDHD3Q9BSH5 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
HDHD3Q9BSH5 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.68□□□□□ -0.06
HDHD3Q9BSH5 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HDHD3Q9BSH5 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HDHD3Q9BSH5 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 AC008741.2-201ENST00000612792 3115 ntBASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 AC117947.1-201ENST00000427448 529 ntBASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 RNF126P1-202ENST00000569893 925 ntBASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HDHD3Q9BSH5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 TERF1P1-201ENST00000311003 1181 ntBASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 HBZP1-201ENST00000354915 429 ntBASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 COX5BP2-201ENST00000392354 334 ntBASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 AL390719.2-201ENST00000606993 987 ntBASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
HDHD3Q9BSH5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms