Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE1Q99829 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CPNE1Q99829 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
CPNE1Q99829 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.36■□□□□ 0.37
CPNE1Q99829 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.36■□□□□ 0.37
CPNE1Q99829 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CPNE1Q99829 IGHV3-41-201ENST00000613121 348 ntBASIC17.36■□□□□ 0.37
CPNE1Q99829 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CPNE1Q99829 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE1Q99829 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE1Q99829 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE1Q99829 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE1Q99829 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE1Q99829 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE1Q99829 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.36■□□□□ 0.37
CPNE1Q99829 EGFEM1P-202ENST00000431685 1563 ntBASIC17.36■□□□□ 0.37
CPNE1Q99829 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE1Q99829 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE1Q99829 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CPNE1Q99829 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE1Q99829 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.35■□□□□ 0.37
CPNE1Q99829 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE1Q99829 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.35■□□□□ 0.37
CPNE1Q99829 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CPNE1Q99829 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE1Q99829 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CPNE1Q99829 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CPNE1Q99829 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE1Q99829 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.35■□□□□ 0.37
CPNE1Q99829 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CPNE1Q99829 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.35■□□□□ 0.37
CPNE1Q99829 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.35■□□□□ 0.37
CPNE1Q99829 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.35■□□□□ 0.37
CPNE1Q99829 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE1Q99829 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE1Q99829 AC011498.5-201ENST00000592027 486 ntBASIC17.35■□□□□ 0.37
CPNE1Q99829 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.35■□□□□ 0.37
CPNE1Q99829 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE1Q99829 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.35■□□□□ 0.37
CPNE1Q99829 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CPNE1Q99829 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.35■□□□□ 0.37
CPNE1Q99829 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE1Q99829 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.35■□□□□ 0.37
CPNE1Q99829 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE1Q99829 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.35■□□□□ 0.37
CPNE1Q99829 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE1Q99829 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE1Q99829 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE1Q99829 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE1Q99829 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.34■□□□□ 0.37
CPNE1Q99829 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CPNE1Q99829 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CPNE1Q99829 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
CPNE1Q99829 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE1Q99829 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE1Q99829 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE1Q99829 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE1Q99829 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE1Q99829 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CPNE1Q99829 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CPNE1Q99829 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE1Q99829 AC246785.2-201ENST00000432512 513 ntBASIC17.34■□□□□ 0.37
CPNE1Q99829 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.34■□□□□ 0.37
CPNE1Q99829 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.34■□□□□ 0.37
CPNE1Q99829 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.34■□□□□ 0.37
CPNE1Q99829 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE1Q99829 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE1Q99829 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
CPNE1Q99829 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE1Q99829 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.34■□□□□ 0.37
CPNE1Q99829 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.34■□□□□ 0.37
CPNE1Q99829 AL353593.2-201ENST00000602529 1483 ntBASIC17.34■□□□□ 0.37
CPNE1Q99829 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE1Q99829 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.34■□□□□ 0.37
CPNE1Q99829 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CPNE1Q99829 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
CPNE1Q99829 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.34■□□□□ 0.37
CPNE1Q99829 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE1Q99829 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CPNE1Q99829 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CPNE1Q99829 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPNE1Q99829 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CPNE1Q99829 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.33■□□□□ 0.37
CPNE1Q99829 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.33■□□□□ 0.37
CPNE1Q99829 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPNE1Q99829 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.33■□□□□ 0.37
CPNE1Q99829 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CPNE1Q99829 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CPNE1Q99829 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPNE1Q99829 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.33■□□□□ 0.37
CPNE1Q99829 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPNE1Q99829 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.33■□□□□ 0.36
CPNE1Q99829 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE1Q99829 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.33■□□□□ 0.36
CPNE1Q99829 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE1Q99829 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.33■□□□□ 0.36
CPNE1Q99829 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE1Q99829 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE1Q99829 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE1Q99829 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms